RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ZNF503-AS2A6NEH8 195 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 H0Y980 276 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 GRPP07492 148 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 HLA-DRB3P79483 266 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 MMDQ15546 238 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR5T1Q8NG75 326 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 GAL3ST2Q9H3Q3 398 aa14.04□□□□□ -0.16
CDC42EP4-201ENST00000335793 SYNGR2O43760 224 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 GLIPR1P48060 266 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR2M7Q8NG81 312 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR5D13Q8NGL4 314 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 SMDT1Q9H4I9 107 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 TAAR3PQ9P1P4 343 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 NTN3O00634 580 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 GCGP01275 180 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 GNB2P62879 340 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 SPSB4Q96A44 273 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 RCC1LQ96I51 464 aaKnown RBP14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 DLL3Q9NYJ7 618 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 OR1C1Q15619 314 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 ZNF808Q8N4W9 903 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 MRPL30Q8TCC3 161 aaKnown RBP14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 FAM173AQ9BQD7 235 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 DEFB127Q9H1M4 99 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 VSIRQ9H7M9 311 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 FUT9Q9Y231 359 aa14.03□□□□□ -0.16
CDC42EP4-201ENST00000335793 PRR14LQ5THK1 2151 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 KRASP01116 189 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 LMO1P25800 156 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 GFRA1P56159 465 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 Q6ZRM9 215 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 RAB40CQ96S21 281 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 SLC39A9Q9NUM3 307 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 ARHGAP21Q5T5U3 1957 aa14.02□□□□□ -0.16
CDC42EP4-201ENST00000335793 FAM90A10PA6NDY2 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A18PA6NE21 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A16PA6NEW6 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A20PA6NIJ5 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A8PA6NJQ4 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A7PA6NKC0 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A22PA8MWA6 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A12PA8MX19 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A5PA8MXJ8 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A23PA8MXZ1 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 HSPB1P04792 205 aaKnown RBP14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A15PP0C7V4 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A13PP0C7W8 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A14PP0C7W9 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 FAM90A24PP0C7X0 464 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 MAS1LP35410 378 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 ARR3P36575 388 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 HBG1P69891 147 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 HBG2P69892 147 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 ADIRFQ15847 76 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLDND2Q8NHS1 167 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM18Q96B42 140 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 ALKBH7Q9BT30 221 aaPredicted RBP14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 PRSS50Q9UI38 385 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 UBE2L5PA0A1B0GUS4 154 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 DAZAP2Q15038 168 aaPredicted RBP14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 DNLZQ5SXM8 178 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 CXorf67Q86X51 503 aaPredicted RBP14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 LYG1Q8N1E2 194 aa14.02□□□□□ -0.17
CDC42EP4-201ENST00000335793 USF3Q68DE3 2245 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 MED13Q9UHV7 2174 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 TRAV24A0A0B4J272 114 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM210A6NLX4 147 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 M0QZK8 103 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 SMPD2O60906 423 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 GGCTO75223 188 aaKnown RBP14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM105Q8N8V8 129 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 LHX4Q969G2 390 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 STRADBQ9C0K7 418 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 ADAMTS20P59510 1910 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 CEP250Q9BV73 2442 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 GTF3C1Q12789 2109 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 PAX9P55771 341 aa14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 RPUSD4Q96CM3 377 aaKnown RBP14.01□□□□□ -0.17
CDC42EP4-201ENST00000335793 A0A1B0GU03 582 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 CDIPTO14735 213 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZXDAP98168 799 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 C1orf194Q5T5A4 169 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 PCSK4Q6UW60 755 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 NAGKQ9UJ70 344 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 SELENOKQ9Y6D0 94 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 DUXBA0A1W2PPF3 345 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 ITGB1BP1O14713 200 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZNF816Q0VGE8 651 aaPredicted RBP14□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZNF506Q5JVG8 444 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 COLCA1Q6ZS62 124 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLEC18AA5D8T8 446 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM164Q5U3C3 297 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLEC18CQ8NCF0 446 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR5P3Q8WZ94 311 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 TTTY12Q9BZ98 90 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZFP30Q9Y2G7 519 aa14□□□□□ -0.17
CDC42EP4-201ENST00000335793 CDKN1BP46527 198 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms