RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 C5orf67F2Z3F1 127 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SS18L1O75177 396 aaPredicted RBP11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CDS2O95674 445 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 BCL2P10415 239 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PGLYRP1O75594 196 aaPredicted RBP11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NUDT3O95989 172 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CD99P14209 185 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ARF6P62330 175 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ABLIM2Q6H8Q1 611 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MIEN1Q9BRT3 115 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 GAPDHP04406 335 aaKnown RBP11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZFP30Q9Y2G7 519 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TRPM6Q9BX84 2022 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TSPAN2O60636 221 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 HKR1P10072 659 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 UNC119Q13432 240 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM214BQ7L5A3 538 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 GPR146Q96CH1 333 aa11.69□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZG16O60844 167 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CKS2P33552 79 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 KIAA1644Q3SXP7 199 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM106CPP0CH98 169 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RND2P52198 227 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SELENOHQ8IZQ5 122 aaKnown RBP11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NPBWR2P48146 333 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SLC25A45Q8N413 288 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM27BQ5VT28 67 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZBTB34Q8NCN2 500 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PKIAP61925 76 aa11.68□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CCDC144NLQ6NUI1 221 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 COL18A1P39060 1754 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NUP214P35658 2090 aaPredicted RBP11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 H0YL77 283 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DXOO77932 396 aaKnown RBP11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 S1PR2O95136 353 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MPV17P39210 176 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 KIAA0100Q14667 2235 aaKnown RBP11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PITPNC1Q9UKF7 332 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 H0Y980 276 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 THY1P04216 161 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CRYBA2P53672 197 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZP4Q12836 540 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 C2orf83Q53S99 150 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LINC01560Q8TB33 94 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SF3B6Q9Y3B4 125 aaKnown RBP11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DLL1O00548 723 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TMEM252Q8N6L7 170 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LIMS1P48059 325 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ABHD12Q8N2K0 398 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LHFPL6Q9Y693 200 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 GLIPR1P48060 266 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 P2RY4P51582 365 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 COTL1Q14019 142 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 GCSAMLQ5JQS6 135 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MUC21A0A0G2JKD1 596 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MUC21A0A140T8X8 626 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MGST3O14880 152 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CX3CL1P78423 397 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MUC21Q5SSG8 566 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 STPG2Q8N412 459 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CNTRLQ7Z7A1 2325 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 C7orf71A4D174 169 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 C1orf53Q5VUE5 145 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MRPL18Q9H0U6 180 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PILRAQ9UKJ1 303 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LDLRAD4O15165 306 aa11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZFC3H1O60293 1989 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-201ENST00000299847 A0A0U1RQV5 110 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms