RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SULT1A2P50226 295 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 CRYBA2P53672 197 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 LY6EQ16553 131 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 OR8G5Q8NG78 346 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 MYOZ3Q8TDC0 251 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 TMEM222Q9H0R3 208 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 GPR132Q9UNW8 380 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 SIPA1L3O60292 1781 aaPredicted RBP9.87□□□□□ -0.83
USP53-201ENST00000274030 MYOFQ9NZM1 2061 aa9.87□□□□□ -0.83
USP53-201ENST00000274030 ELOA3CA0A087WX78 387 aaPredicted RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 DEDDO75618 318 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 PRDM14Q9GZV8 571 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 HOXA6P31267 233 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 C16orf92Q96LL3 132 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 TLNRD1Q9H1K6 362 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 INTS1Q8N201 2190 aaKnown RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 H0Y980 276 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 HAX1O00165 279 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 RND2P52198 227 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 HERVK_113P61574 105 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 RPL8P62917 257 aaKnown RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 ALX4Q9H161 411 aaPredicted RBP9.86□□□□□ -0.83
USP53-201ENST00000274030 PIKFYVEQ9Y2I7 2098 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 IGKV1D-42A0A075B6H8 117 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 ODAMA1E959 279 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 H3BVH4 76 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 M0R143 59 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 UNQ5815/PRO19632Q6UWF5 114 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 WDFY1Q8IWB7 410 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 ZNF645Q8N7E2 425 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 GPR146Q96CH1 333 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 CDK2AP1O14519 115 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 SP9P0CG40 484 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 GLIPR1P48060 266 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 NUBP1P53384 320 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 ZNF345Q14585 488 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 UBE2V2Q15819 145 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 SLC25A33Q9BSK2 321 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 ELOVL1Q9BW60 279 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 DDA1Q9BW61 102 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 FAM206AQ9NX38 181 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 MIOXQ9UGB7 285 aa9.86□□□□□ -0.83
USP53-201ENST00000274030 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 CASP8AP2Q9UKL3 1982 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 PGPA6NDG6 321 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 ID4P47928 161 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 NMUP48645 174 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 UCNP55089 124 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 C19orf48Q6RUI8 117 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 H1FOOQ8IZA3 346 aaPredicted RBP9.85□□□□□ -0.83
USP53-201ENST00000274030 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 CALYQ9NYX4 217 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 LINC00862A6NCI5 91 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
USP53-201ENST00000274030 FAM74A7A6NL05 159 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 KLF4O43474 513 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 FCGR2BP31994 310 aaPredicted RBP9.85□□□□□ -0.83
USP53-201ENST00000274030 ID1P41134 155 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 M0R3E3 92 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 BTF3P20290 206 aaKnown RBP9.85□□□□□ -0.83
USP53-201ENST00000274030 STARD6P59095 220 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 USP54Q70EL1 1684 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 LOC101059948A0A1B0GTJ6 334 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 IGKV3-11P04433 115 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 CTSSP25774 331 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 PCOLCEQ15113 449 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 AKIRIN1Q9H9L7 192 aaPredicted RBP9.85□□□□□ -0.83
USP53-201ENST00000274030 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
USP53-201ENST00000274030 RAMP1O60894 148 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 HSPB1P04792 205 aaKnown RBP9.84□□□□□ -0.83
USP53-201ENST00000274030 CLDN18P56856 261 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 ARL6IP6Q8N6S5 226 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 FOCADQ5VW36 1801 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 ZG16O60844 167 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SERF2P84101 59 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 TMEM78Q5T7P6 136 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 ZNF343Q6P1L6 599 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 ZNF738Q8NE65 137 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 OR4B1Q8NGF8 309 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 RFPL3SP0C7P2 107 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 COX6B1P14854 86 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 COX19Q49B96 90 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SPSB2Q99619 263 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 WNT5BQ9H1J7 359 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SMIM10L1P0DMW3 83 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms