RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TOR2AQ5JU69 321 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 CENPVQ7Z7K6 275 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PAQR4Q8N4S7 273 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-201ENST00000262539 OR4S1Q8NGB4 309 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 DUX5Q96PT3 197 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 FBXL17Q9UF56 701 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 RAB19A4D1S5 217 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 BTCP35070 178 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 FAM162BQ5T6X4 162 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PPP1R1CQ8WVI7 109 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 OR2T8A6NH00 312 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 UQCRFS1P47985 274 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 FOXL2P58012 376 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ZP1P60852 638 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 CLEC12BQ2HXU8 276 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 CLEC18BQ6UXF7 455 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 RNF166Q96A37 237 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 H0Y980 276 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 GYPAP02724 150 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 SEC11BP0C7V7 166 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 CD80P33681 288 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 C19orf57Q0VDD7 668 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 C19orf54Q5BKX5 351 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 DOLPP1Q86YN1 238 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ANGPTL6Q8NI99 470 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 Q9N2K0 584 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 KLK13Q9UKR3 277 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 HILPDAQ9Y5L2 63 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 U3KQ87 197 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 SPTBN2O15020 2390 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PPP5D1E7EU14 171 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF207O43670 478 aaKnown RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 NAPSAO96009 420 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ADRB1P08588 477 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF146Q15072 292 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PDZD11Q5EBL8 140 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 C19orf35Q6ZS72 473 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 MYPOPQ86VE0 399 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 OR4C12Q96R67 309 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 SLC2A9Q9NRM0 540 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 JPT1Q9UK76 154 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 C17orf51A8MQB3 221 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF727A8MUV8 499 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 SMLR1H3BR10 107 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PATE4P0C8F1 98 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 UCP1P25874 307 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PSMB2P49721 201 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PDLIM4P50479 330 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 MEF2CQ06413 473 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 SMUG1Q53HV7 270 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 FFAR4Q5NUL3 377 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 THADAQ6YHU6 1953 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 H3BP45 60 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 C6orf201Q7Z4U5 140 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 LSM10Q969L4 123 aaKnown RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 AQP10Q96PS8 301 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 OPN3Q9H1Y3 402 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-201ENST00000262539 WDR13Q9H1Z4 485 aa7.03□□□□□ -1.28
PTPN3-201ENST00000262539 PCNX2A6NKB5 2137 aa7.02□□□□□ -1.28
PTPN3-201ENST00000262539 GGNBP1Q5YKI7 109 aa7.02□□□□□ -1.28
PTPN3-201ENST00000262539 AMMECR1LQ6DCA0 310 aa7.02□□□□□ -1.28
PTPN3-201ENST00000262539 KLHDC3Q9BQ90 382 aa7.02□□□□□ -1.28
PTPN3-201ENST00000262539 OR2C1O95371 312 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 RPL12P30050 165 aaKnown RBP7.02□□□□□ -1.29
PTPN3-201ENST00000262539 Q8WTZ3 238 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 TCEAL7Q9BRU2 100 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 TMEM222Q9H0R3 208 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 MBPP02686 304 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-201ENST00000262539 LY6G6FQ5SQ64 297 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 MBNL2Q5VZF2 373 aaKnown RBP7.02□□□□□ -1.29
PTPN3-201ENST00000262539 IGHV3-21A0A0B4J1V1 117 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 ZNF735P0CB33 412 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 PGA5P0DJD9 388 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 TMED6Q8WW62 240 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 A0A0G2JMM0 328 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 A0A1W2PPB8 328 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 A0A1W2PRS3 328 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 KIR3DP1A8MWS1 328 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 HIKESHIQ53FT3 197 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
PTPN3-201ENST00000262539 NPAS1Q99742 590 aa7.02□□□□□ -1.29
PTPN3-201ENST00000262539 SLC25A10Q9UBX3 287 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-201ENST00000262539 OR3A1P47881 315 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 TM4SF5O14894 197 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 TGOLN2O43493 480 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 MRPS11P82912 194 aaKnown RBP7.01□□□□□ -1.29
PTPN3-201ENST00000262539 LGALSLQ3ZCW2 172 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-201ENST00000262539 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 TBC1D26Q86UD7 250 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 KLF14Q8TD94 323 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-201ENST00000262539 CXorf58Q96LI9 332 aa7.01□□□□□ -1.29
PTPN3-201ENST00000262539 FLVCR2Q9UPI3 526 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms