RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CXorf1O96002 111 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 OSR1Q8TAX0 266 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF426Q9BUY5 554 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZDHHC11Q9H8X9 412 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 SEC14L6B5MCN3 397 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 MOSP00540 346 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 UQCC3Q6UW78 93 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 NCCRP1Q6ZVX7 275 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 LINC00052Q96N35 136 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMPRSS13Q9BYE2 586 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SLC25A22Q9H936 323 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 AKIP1Q9NQ31 210 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 RNF212Q495C1 297 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 A0A1W2PPB8 328 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 KIR3DP1A8MWS1 328 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 NTN1O95631 604 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 PPP1R1AQ13522 171 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SNAI3Q3KNW1 292 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TM4SF20Q53R12 229 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 FAM27D1Q5T7N8 215 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SLC2A9Q9NRM0 540 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TRBV5-7A0A0A0MS05 114 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 MYOD1P15172 320 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 G6PCP35575 357 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 H3F3CQ6NXT2 135 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SLC35E3Q7Z769 313 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF439Q8NDP4 499 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 OR5C1Q8NGR4 320 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 QTRT1Q9BXR0 403 aaKnown RBP8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 NAGKQ9UJ70 344 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 KCNE5Q9UJ90 142 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 SIRT4Q9Y6E7 314 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 AGAP20933 346 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TPPP2P59282 170 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 LGALSLQ3ZCW2 172 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 BLNKQ8WV28 456 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 DDB2Q92466 427 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 PHYHIPLQ96FC7 376 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM165Q9HC07 324 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 VSIG4Q9Y279 399 aa8.32□□□□□ -1.08
TNFRSF9-204ENST00000615230 DEDDO75618 318 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 CD5P06127 495 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 DHRS2Q13268 280 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 FAM122BQ7Z309 247 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 GPR82Q96P67 336 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 RBM14Q96PK6 669 aaKnown RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 CEACAM18A8MTB9 384 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 GATCO43716 136 aaKnown RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 NDUFA6P56556 154 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM50BP56557 158 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 RIGQ13278 110 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM78Q5T7P6 136 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 LINC00114Q6XXX2 140 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 EIF4E3Q8N5X7 224 aaKnown RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 KLHDC2Q9Y2U9 406 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 MAP1LC3B2A6NCE7 125 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 PDE6DO43924 150 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 PRSS53Q2L4Q9 553 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 LRRC75BQ2VPJ9 315 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 TOLLIPQ9H0E2 274 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 KIR2DL2P43627 348 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 FXYD3Q14802 87 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM123Q8N131 208 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 NPVFQ9HCQ7 196 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 SIRT7Q9NRC8 400 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF705GA8MUZ8 300 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 MAGEB1P43366 347 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 SP6Q3SY56 376 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 MINOS1Q5TGZ0 78 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 FAAP20Q6NZ36 180 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 LRRTM1Q86UE6 522 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 MINOS1-NBL1R4GNA1 71 aa8.31□□□□□ -1.08
TNFRSF9-204ENST00000615230 DOCK3Q8IZD9 2030 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 PSG2P11465 335 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 CRYGSP22914 178 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 UCP3P55916 312 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 FAM74A3Q4VXF1 159 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 FA2HQ7L5A8 372 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 SAT2Q96F10 170 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF488Q96MN9 340 aa8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 MTCL1Q9Y4B5 1905 aaKnown RBP8.3□□□□□ -1.08
TNFRSF9-204ENST00000615230 DCTN6O00399 190 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms