RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 BHLHA15Q7RTS1 189 aaPredicted RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 ZMAT5Q9UDW3 170 aaKnown RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 PQLC2LA1A4F0 135 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 CD81P60033 236 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 UBE2L3P68036 154 aaKnown RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 PSG5Q15238 335 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 WDR73Q6P4I2 378 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 ZNF837Q96EG3 531 aaPredicted RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 DOK5Q9P104 306 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 FGF16O43320 207 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 ZIC3O60481 467 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 CCL1P22362 96 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 FHL1Q13642 323 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 TRIP6Q15654 476 aaKnown RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 LDLRAD4O15165 306 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 GATCO43716 136 aaKnown RBP10.67□□□□□ -0.7
CDH1-212ENST00000611625 G0S2P27469 103 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 CD1BP29016 333 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 AMTP48728 403 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 GLRX5Q86SX6 157 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 P2RX4Q99571 388 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 RBKSQ9H477 322 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 TMEM265A0A087WTH1 108 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 A0A0A6YYD4 124 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 TGIF2-C20orf24A0A0A6YYL0 155 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 FBP1P09467 338 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 RFPL3SP0C7P2 107 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 CHRNB4P30926 498 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 UCP2P55851 309 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
CDH1-212ENST00000611625 PKIAP61925 76 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 PAX5Q02548 391 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 FAM89BQ8N5H3 189 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 DEFB124Q8NES8 71 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 OR1L1Q8NH94 360 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 MESP1Q9BRJ9 268 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 FAM90A26D6RGX4 464 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 CXorf1O96002 111 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 COL10A1Q03692 680 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 MOB3BQ86TA1 216 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 CALHM1Q8IU99 346 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 NOL4LQ96MY1 436 aaPredicted RBP10.66□□□□□ -0.7
CDH1-212ENST00000611625 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
CDH1-212ENST00000611625 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
CDH1-212ENST00000611625 PLAURQ03405 335 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 PPP1R32Q7Z5V6 425 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 HES7Q9BYE0 225 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 REG4Q9BYZ8 158 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 ARL2-SNX15V9GYD0 113 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 ANAPC1Q9H1A4 1944 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 MMP7P09237 267 aaPredicted RBP10.66□□□□□ -0.7
CDH1-212ENST00000611625 PGA5P0DJD9 388 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 TCL1AP56279 114 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 CDCP2Q5VXM1 449 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 TMEM108Q6UXF1 575 aa10.66□□□□□ -0.7
CDH1-212ENST00000611625 SRSF3P84103 164 aaKnown RBP10.65□□□□□ -0.7
CDH1-212ENST00000611625 TEPPQ6URK8 271 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 ZNF826PQ6ZT77 177 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 ZNF645Q8N7E2 425 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.7
CDH1-212ENST00000611625 MISP3Q96FF7 219 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 GDF15Q99988 308 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 CLPSP04118 112 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 PRDX2P32119 198 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 TCTEX1D1Q8N7M0 179 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 CISD1Q9NZ45 108 aaKnown RBP10.65□□□□□ -0.7
CDH1-212ENST00000611625 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 WIPI2Q9Y4P8 454 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 IGLV3-32A0A0A0MS00 114 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 HPRT1P00492 218 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 UCP1P25874 307 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 SGMS2Q8NHU3 365 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 CCL17Q92583 94 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 ZNF552Q9H707 407 aaPredicted RBP10.65□□□□□ -0.7
CDH1-212ENST00000611625 METTL1Q9UBP6 276 aaKnown RBP10.65□□□□□ -0.7
CDH1-212ENST00000611625 TIMM9Q9Y5J7 89 aa10.65□□□□□ -0.7
CDH1-212ENST00000611625 TNFRSF9Q07011 255 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 LYZL4Q96KX0 146 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 RPRMQ9NS64 109 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 CDX1P47902 265 aaPredicted RBP10.64□□□□□ -0.71
CDH1-212ENST00000611625 CEBPDP49716 269 aaPredicted RBP10.64□□□□□ -0.71
CDH1-212ENST00000611625 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
CDH1-212ENST00000611625 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
CDH1-212ENST00000611625 VSTM2AQ8TAG5 236 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 FAM131CQ96AQ9 280 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 RNF7Q9UBF6 113 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 ZNF253O75346 499 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 FAM157CP0CG43 387 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 CFHR1Q03591 330 aa10.64□□□□□ -0.71
CDH1-212ENST00000611625 COX19Q49B96 90 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms