RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 RPL5P46777 297 aaKnown RBP9.9□□□□□ -0.82
UPF1-203ENST00000594504 RAB7AP51149 207 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 ARFRP1Q13795 201 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 DIAPH2-AS1Q14236 149 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 GNMTQ14749 295 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 CDNFQ49AH0 187 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 MORN2Q502X0 79 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 FAM53AQ6NSI3 398 aaPredicted RBP9.9□□□□□ -0.82
UPF1-203ENST00000594504 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 C5orf24Q7Z6I8 188 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 ZNF329Q86UD4 541 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 OR52L2PQ8NGH6 319 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 AKR1E2Q96JD6 320 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 YPEL2Q96QA6 119 aa9.9□□□□□ -0.82
UPF1-203ENST00000594504 NOTCH3Q9UM47 2321 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 TRDCB7Z8K6 153 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 SLC31A2O15432 143 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 TALDO1P37837 337 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 ZNF137PP52743 207 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 PITPNAQ00169 270 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
UPF1-203ENST00000594504 KIR2DS1Q14954 304 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 CT45A1Q5HYN5 189 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 HACD4Q5VWC8 232 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 C18orf65Q6ZTR6 163 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 OR8H3Q8N146 312 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 OR4X2Q8NGF9 303 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 CT45A3Q8NHU0 189 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 ABHD14AQ9BUJ0 271 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 ABCG5Q9H222 651 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 DIABLOQ9NR28 239 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 LINC00527Q9UJ94 153 aa9.89□□□□□ -0.83
UPF1-203ENST00000594504 A0A1W2PPI3 338 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 TMEM235A6NFC5 223 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 HSD17B6O14756 317 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 GAPDHP04406 335 aaKnown RBP9.88□□□□□ -0.83
UPF1-203ENST00000594504 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
UPF1-203ENST00000594504 SCTP09683 121 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 DTYMKP23919 212 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ZBTB25P24278 435 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 RORCP51449 518 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ZNF134P52741 427 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 HNF4GQ14541 408 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 SRSF7Q16629 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
UPF1-203ENST00000594504 PNLIPRP3Q17RR3 467 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ZNF260Q3ZCT1 412 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 UBE2NLQ5JXB2 153 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 Q6ZS49 121 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 CLVS1Q8IUQ0 354 aaPredicted RBP9.88□□□□□ -0.83
UPF1-203ENST00000594504 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 OR2AK2Q8NG84 335 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 OR4A4PQ8NGN8 299 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 RAB2BQ8WUD1 216 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ACOT12Q8WYK0 555 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 NOL4LQ96MY1 436 aaPredicted RBP9.88□□□□□ -0.83
UPF1-203ENST00000594504 BCL7BQ9BQE9 202 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 DCSTAMPQ9H295 470 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 SLC23A1Q9UHI7 598 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 SCOCQ9UIL1 159 aa9.88□□□□□ -0.83
UPF1-203ENST00000594504 ELF5Q9UKW6 265 aaPredicted RBP9.88□□□□□ -0.83
UPF1-203ENST00000594504 TRAV18A0A075B6X5 111 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 PSMB11A5LHX3 300 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 FAM90A9PA6NNJ1 464 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 ITGB1BP1O14713 200 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 FABP7O15540 132 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 HSPA12AO43301 675 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 TXNL1O43396 289 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 DIRAS3O95661 229 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 FAM106CPP0CH98 169 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 TMBIM6P55061 237 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 GNG2P59768 71 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 ETV3LQ6ZN32 361 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 THNSL2Q86YJ6 484 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 DRAM1Q8N682 238 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 OR56B4Q8NH76 319 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 RTN4IP1Q8WWV3 396 aaPredicted RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 RBMXL1Q96E39 390 aaKnown RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 S100A16Q96FQ6 103 aaKnown RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 RCC1LQ96I51 464 aaKnown RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 CABLES2Q9BTV7 478 aa9.87□□□□□ -0.83
UPF1-203ENST00000594504 ZNF230Q9UIE0 474 aaPredicted RBP9.87□□□□□ -0.83
UPF1-203ENST00000594504 IGHV1-3A0A0C4DH29 117 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 IGKV1-6A0A0C4DH72 117 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 LINC01548A6NM66 108 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 XRCC3O43542 346 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 LANCL1O43813 399 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 CEACAM6P40199 344 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 REG1BP48304 166 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 HES1Q14469 280 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 TGIF2LXQ8IUE1 241 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 NUDCD2Q8WVJ2 157 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 EDARADDQ8WWZ3 215 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 AP3S1Q92572 193 aa9.86□□□□□ -0.83
UPF1-203ENST00000594504 CMTM3Q96MX0 182 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms