RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 CACNA1GO43497 2377 aa2.86□□□□□ -1.95
PABPN1-204ENST00000554062 NUMA1Q14980 2115 aa2.86□□□□□ -1.95
PABPN1-204ENST00000554062 FAM208BQ5VWN6 2430 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 MYH10P35580 1976 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TP53BP1Q12888 1972 aaPredicted RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 FASNP49327 2511 aaKnown RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 NOTCH3Q9UM47 2321 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 IGLV3-12A0A075B6K2 115 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TRAV8-2A0A0B4J237 113 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 C1orf232A0A0U1RR37 186 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 MYBPHLA2RUH7 354 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 C9J4A7 227 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PRAMEF26H0Y7S4 382 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ITGB1BP1O14713 200 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 GYG2O15488 501 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TRAPPC3O43617 180 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 SYNGR1O43759 233 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PSIP1O75475 530 aaKnown RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 LIMS3P0CW19 117 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 LIMS4P0CW20 117 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PVALBP20472 110 aaPredicted RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 CD40LGP29965 261 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TSPOP30536 169 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PYCR1P32322 319 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ACOT2P49753 483 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 STC1P52823 247 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PRDX1Q06830 199 aaKnown RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 EIF4EBP1Q13541 118 aaPredicted RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 SSX1Q16384 188 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ACTBL2Q562R1 376 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 FAM162BQ5T6X4 162 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 SDHAF4Q5VUM1 108 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TPGS1Q6ZTW0 290 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 PLCZ1Q86YW0 608 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 C10orf107Q8IVU9 208 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ZNF695Q8IW36 515 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ZNF101Q8IZC7 436 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ZDHHC22Q8N966 263 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ZNF555Q8NEP9 628 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 OR2AE1Q8NHA4 323 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 FAM57AQ8TBR7 257 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 TCEAL4Q96EI5 215 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 C7orf50Q9BRJ6 194 aaKnown RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 MARVELD1Q9BSK0 173 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 THTPAQ9BU02 230 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 KLF13Q9Y2Y9 288 aaPredicted RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 S4R3C0 116 aa2.85□□□□□ -1.95
PABPN1-204ENST00000554062 GOLGA4Q13439 2230 aaKnown RBP2.85□□□□□ -1.95
PABPN1-204ENST00000554062 ASXL3Q9C0F0 2248 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 VPS37CA5D8V6 355 aaPredicted RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 BTNL10A8MVZ5 291 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 CCL16O15467 120 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 CXorf1O96002 111 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 ASS1P00966 412 aaKnown RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 IGKV3-11P04433 115 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 MLNP12872 115 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 F8A1P23610 371 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 CASP1P29466 404 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 SLC6A1P30531 599 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 MEF2CQ06413 473 aaPredicted RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 MED21Q13503 144 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 EIF4EBP2Q13542 120 aaPredicted RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 KLHL12Q53G59 568 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 MED27Q6P2C8 311 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 DGAT2L6Q6ZPD8 337 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 FA2HQ7L5A8 372 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 NEGR1Q7Z3B1 354 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 GALNT10Q86SR1 603 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 TMEM86AQ8N2M4 240 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 LINC00337Q8N6G1 96 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 ACTL9Q8TC94 416 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 SPPL2BQ8TCT7 592 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 TWIST2Q8WVJ9 160 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 CCL17Q92583 94 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 IP6K3Q96PC2 410 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 ANAPC13Q9BS18 74 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 DHX35Q9H5Z1 703 aaKnown RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 WDR54Q9H977 334 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 INIPQ9NRY2 104 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 EURLQ9NYK6 297 aa2.84□□□□□ -1.95
PABPN1-204ENST00000554062 C14orf166Q9Y224 244 aaKnown RBP2.84□□□□□ -1.95
PABPN1-204ENST00000554062 DOCK4Q8N1I0 1966 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 HELZ2Q9BYK8 2649 aaKnown RBP2.83□□□□□ -1.96
PABPN1-204ENST00000554062 MUC22E2RYF6 1773 aaPredicted RBP2.83□□□□□ -1.96
PABPN1-204ENST00000554062 A0A1B0GXF2 115 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 F5H5K5 113 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 M0QXV9 152 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 SLC31A1O15431 190 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 HCRTO43612 131 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 PDCD6O75340 191 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 NDUFS6O75380 124 aaKnown RBP2.83□□□□□ -1.96
PABPN1-204ENST00000554062 DHRS3O75911 302 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 WISP3O95389 354 aaPredicted RBP2.83□□□□□ -1.96
PABPN1-204ENST00000554062 LHBP01229 141 aa2.83□□□□□ -1.96
PABPN1-204ENST00000554062 IGHV1-46P01743 117 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms