RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
CLOCK-211ENST00000513440 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 DFFBO76075 338 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 DLK1P80370 383 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 GALMQ96C23 342 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 RAB40CQ96S21 281 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 ST8SIA5O15466 376 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 PTBP3O95758 552 aaKnown RBP11.83□□□□□ -0.52
CLOCK-211ENST00000513440 HBZP02008 142 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF787Q6DD87 383 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 COA4Q9NYJ1 87 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 KIAA1456Q9P272 454 aa11.83□□□□□ -0.52
CLOCK-211ENST00000513440 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
CLOCK-211ENST00000513440 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 DEFA4P12838 97 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 ERVK11-1P61568 191 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 OR4C12Q96R67 309 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 S1PR2O95136 353 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 MDH2P40926 338 aaKnown RBP11.82□□□□□ -0.52
CLOCK-211ENST00000513440 RAB2AP61019 212 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 FIP1L1Q6UN15 594 aaKnown RBP11.82□□□□□ -0.52
CLOCK-211ENST00000513440 SSX9Q7RTT3 188 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 IGHV3OR15-7A0A075B7D8 119 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 CECR9P0C854 216 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 MEOX2P50222 304 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 Q8IYB0 196 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 CLDND2Q8NHS1 167 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 PSG11Q9UQ72 335 aa11.82□□□□□ -0.52
CLOCK-211ENST00000513440 C17orf98A8MV24 154 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ACAA1P09110 424 aaPredicted RBP11.81□□□□□ -0.52
CLOCK-211ENST00000513440 BMP5P22003 454 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 LMO1P25800 156 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
CLOCK-211ENST00000513440 COL10A1Q03692 680 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 RHEBQ15382 184 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 Q3ZCU0 254 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 MOB1BQ7L9L4 216 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF610Q8N9Z0 462 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 RBKSQ9H477 322 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.81□□□□□ -0.52
CLOCK-211ENST00000513440 Q6ZT83 130 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 OR2Z1Q8NG97 314 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 NIPSNAP3BQ9BS92 247 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
CLOCK-211ENST00000513440 CLCF1Q9UBD9 225 aa11.81□□□□□ -0.52
CLOCK-211ENST00000513440 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 OR13A1Q8NGR1 328 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.8□□□□□ -0.52
CLOCK-211ENST00000513440 IQCF6A8MYZ5 107 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 MMP9P14780 707 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 GCH1P30793 250 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 SLC38A11Q08AI6 406 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF146Q15072 292 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF726P1Q15940 193 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 COQ2Q96H96 371 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
CLOCK-211ENST00000513440 FTH1P19P0C7X4 201 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 OR8G5Q8NG78 346 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 LOXL4Q96JB6 756 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
CLOCK-211ENST00000513440 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 MDKP21741 143 aaPredicted RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF83P51522 516 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 HBG1P69891 147 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 HBG2P69892 147 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 WDR31Q8NA23 367 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 LRRC29Q8WV35 223 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 TMPRSS5Q9H3S3 457 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 INTS1Q8N201 2190 aaKnown RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 ROS1P08922 2347 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 OTOGLQ3ZCN5 2332 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 ZG16O60844 167 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 CXCL1P09341 107 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 WDR82Q6UXN9 313 aa11.79□□□□□ -0.52
CLOCK-211ENST00000513440 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
CLOCK-211ENST00000513440 ODAMA1E959 279 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 HBE1P02100 147 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 FAM201AQ5SY85 155 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 ACP7Q6ZNF0 438 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 ZNF645Q8N7E2 425 aa11.78□□□□□ -0.52
CLOCK-211ENST00000513440 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
CLOCK-211ENST00000513440 YIF1AO95070 293 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms