RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 RNASE6Q93091 150 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 CDH20Q9HBT6 801 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 ZG16O60844 167 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 CECR9P0C854 216 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 OMGP23515 440 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF83P51522 516 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 PAX9P55771 341 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 TAS2R30P59541 319 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 SOHLH1Q5JUK2 328 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 AKR1C8PQ5T2L2 129 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 RDH5Q92781 318 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF488Q96MN9 340 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 POLDIP2Q9Y2S7 368 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 DIDO1Q9BTC0 2240 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 HIVEP3Q5T1R4 2406 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 IGHV1-18A0A0C4DH31 117 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 HS3ST1O14792 307 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 LILRA1O75019 489 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 CST7O76096 145 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 CD200P41217 278 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 SULT1A1P50225 295 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 TLE4Q04727 773 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 GPR146Q96CH1 333 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 C12orf57Q99622 126 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 WSB1Q9Y6I7 421 aa13.5□□□□□ -0.25
SQSTM1-213ENST00000510187 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 TRAV1-1A0A0B4J248 108 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 M0R1B8 84 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 TXNL1O43396 289 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 HSPB1P04792 205 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 CA6P23280 308 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 AKR1C3P42330 323 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 S100A12P80511 92 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF506Q5JVG8 444 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 OR2T2Q6IF00 324 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 ZFP82Q8N141 532 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 C2CD4CQ8TF44 421 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 OR51B6Q9H340 312 aa13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 LIN7CQ9NUP9 197 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-213ENST00000510187 KIAA1324LA8MWY0 1029 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 TNFSF12O43508 249 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 IFNA5P01569 189 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 OR13C7P0DN81 318 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 RAB5AP20339 215 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 MEOX2P50222 304 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 ERVK11-1P61568 191 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 SSX8Q7RTT4 187 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 WFIKKN1Q96NZ8 548 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 GPHA2Q96T91 129 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
SQSTM1-213ENST00000510187 A0A0G2JRQ6 117 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 A0A1W2PPH5 198 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 UBE2CO00762 179 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 GPR37O15354 613 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 S100A8P05109 93 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 PSG2P11465 335 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 GRNP28799 593 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF154Q13106 437 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 C3orf36Q3SXR2 165 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 RARRES2Q99969 163 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 RALYQ9UKM9 306 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 WIPI2Q9Y4P8 454 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 A0A087WWC5 75 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 A6NLC8 198 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 SLC33A1O00400 549 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 RHBDL1O75783 438 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 CLDN14O95500 239 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 THBDP07204 575 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 ACAA1P09110 424 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 OR8U8P0C7N1 319 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 EPHA1P21709 976 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 CCL20P78556 96 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 TESK1Q15569 626 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF295-AS1Q8N0V1 137 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 RNASE11Q8TAA1 199 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 ABHD14AQ9BUJ0 271 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 MBNL3Q9NUK0 354 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 RNF150Q9ULK6 438 aa13.47□□□□□ -0.25
SQSTM1-213ENST00000510187 IGHV2OR16-5A0A0B4J2B6 119 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 TMEM210A6NLX4 147 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 RNF212BA8MTL3 300 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 SMPD2O60906 423 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 OR2H2O95918 312 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 IGLV2-14P01704 120 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 S100A6P06703 90 aa13.46□□□□□ -0.25
SQSTM1-213ENST00000510187 PGA5P0DJD9 388 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms