RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MRGPRDQ8TDS7 321 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 NEK7Q8TDX7 302 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 NPIPB3Q92617 1050 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 ARL11Q969Q4 196 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 FAM46BQ96A09 425 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 MALSU1Q96EH3 234 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 FAAP24Q9BTP7 215 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CLEC7AQ9BXN2 247 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 BARHL1Q9BZE3 327 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 SELENOIQ9C0D9 397 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CTDSP1Q9GZU7 261 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 KCNK15Q9H427 330 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 RHOFQ9HBH0 211 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 ABCB10Q9NRK6 738 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CALYQ9NYX4 217 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 FOXJ3Q9UPW0 622 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 TPRKBQ9Y3C4 175 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 MMP24Q9Y5R2 645 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 PEX16Q9Y5Y5 336 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 MEGF8Q7Z7M0 2845 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 GAGE10A6NGK3 116 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 ZNF729A6NN14 1252 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 MCRIP1C9JLW8 97 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 LY6LH3BQJ8 138 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 BUB1B-PAK6H3BSN5 160 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 PRYO14603 147 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 IGLV1-47P01700 117 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 RBP4P02753 201 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 IGHV3-43DP0DP04 118 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 LYL1P12980 280 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 MGMTP16455 207 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 RCC1P18754 421 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 FUT3P21217 361 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 CRHBPP24387 322 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 HTR2CP28335 458 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 GABRA5P31644 462 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 SSTR5P35346 364 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 REG1BP48304 166 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 GNG10P50151 68 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 PRRX1P54821 245 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 TAS2R43P59537 309 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 FABP5Q01469 135 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 BDH1Q02338 343 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 TPBGQ13641 420 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 DIAPH2-AS1Q14236 149 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 IL13RA2Q14627 380 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 RSBN1Q5VWQ0 802 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 RNLSQ5VYX0 342 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 FAM90A2PQ658T7 463 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 SIGIRRQ6IA17 410 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR52W1Q6IF63 320 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 RAB12Q6IQ22 244 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 LYPD6Q86Y78 171 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 MS4A15Q8N5U1 240 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR4P4Q8NGL7 312 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR4C13Q8NGP0 309 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR4K15Q8NH41 348 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR1L1Q8NH94 360 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 SGMS2Q8NHU3 365 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 FAM110DQ8TAY7 271 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 CAPSLQ8WWF8 208 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 UFD1Q92890 307 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 CPNE2Q96FN4 548 aaPredicted RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 GFI1Q99684 422 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 MGLLQ99685 303 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 ANKRD60Q9BZ19 345 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 VCX3BQ9H321 246 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 GAL3ST2Q9H3Q3 398 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 C16orf95Q9H693 158 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 TAS2R3Q9NYW6 316 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 IDI2-AS1Q9NZ38 188 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 IL36GQ9NZH8 169 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 OR6C3Q9NZP0 311 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 PSG11Q9UQ72 335 aa3.61□□□□□ -1.83
NUP54-206ENST00000508465 AK6Q9Y3D8 172 aaKnown RBP3.61□□□□□ -1.83
NUP54-206ENST00000508465 DSCAML1Q8TD84 2053 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 A0A0A6YYD4 124 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 IGHV3-72A0A0B4J1Y9 119 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 A0A1B0GUS0 222 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 TMEM30CPA0ZSE6 113 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SMIM30A4D0T7 59 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 FAM90A7PA6NKC0 464 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 VGLL3A8MV65 326 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 FAM90A22PA8MWA6 464 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 FAM90A12PA8MX19 464 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 FAM90A23PA8MXZ1 464 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 LEUTXA8MZ59 168 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 C12orf77C9JDV5 145 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 NPIPB11E5RHQ5 1161 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 C15orf65H3BRN8 121 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 J3QR06 171 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SDCBPO00560 298 aaPredicted RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 TIMM23O14925 209 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SLC31A2O15432 143 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SOCS1O15524 211 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms