RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MT-CO2P00403 227 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 PDGFBP01127 241 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 MMP7P09237 267 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM87AP0C7U9 286 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 IAPPP10997 89 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 RAC2P15153 192 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 NDUFB7P17568 137 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FOLR3P41439 243 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FGF8P55075 233 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ELLP55199 621 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 UBE2NP61088 152 aaKnown RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ERVS71-1P61550 626 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 PAX5Q02548 391 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNFRSF9Q07011 255 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRA2AQ13595 282 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGFBP7Q16270 282 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 COX19Q49B96 90 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 SPANXN5Q5MJ07 72 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 C1orf194Q5T5A4 169 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM180AQ6UWF9 173 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM14EPQ6UXP3 125 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 Q6ZPA2 131 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TGIF2LXQ8IUE1 241 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF664Q8N3J9 261 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 WDR31Q8NA23 367 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10P1Q8NGE3 313 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10G9Q8NGN4 311 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10G7Q8NGN6 311 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10D3Q8NH80 312 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM216AQ8WUB2 273 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 RPUSD4Q96CM3 377 aaKnown RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 MISP3Q96FF7 219 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 CCDC74BQ96LY2 380 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM68Q96MH6 324 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ALKBH3Q96Q83 286 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 PCGF1Q9BSM1 259 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 RTL8AQ9BWD3 113 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FKBP11Q9NYL4 201 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF581Q9P0T4 197 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 B4GALT7Q9UBV7 327 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 HSPB7Q9UBY9 170 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 NAGKQ9UJ70 344 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 ERRFI1Q9UJM3 462 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 BOKQ9UMX3 212 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 WASF3Q9UPY6 502 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 FUT9Q9Y231 359 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRAPPC1Q9Y5R8 145 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
HMGB3P16-201ENST00000508037 TRBV9A0A0B4J1U6 114 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIR2DL5BA0A0G2JN68 375 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIR2DL5BA0A0G2JPC4 375 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A0G2JRQ6 117 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 A0A1B0GWJ7 208 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM210A6NLX4 147 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 A8MXE2 369 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 C11orf94C9JXX5 98 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 SH2D1BO14796 132 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 NXPH3O95157 252 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 KRASP01116 189 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 COX6A1P12074 109 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 SELLP14151 372 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF16P17020 682 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 EPHA8P29322 1005 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 CDC34P49427 236 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNFSF10P50591 281 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 DUSP3P51452 185 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 B3GALT5-AS1P59052 145 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TPPP2P59282 170 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 GNB2P62879 340 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 ARF1P84077 181 aaKnown RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 PLGLB1Q02325 96 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 FOXL1Q12952 345 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 GAGE1Q13065 139 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 MRPL49Q13405 166 aaKnown RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 PDCD1Q15116 288 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TESK1Q15569 626 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM183BQ1AE95 376 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 VWC2Q2TAL6 325 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 FFAR4Q5NUL3 377 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR8G2PQ6IF36 304 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TIPARPQ7Z3E1 657 aaKnown RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 NUFIP2Q7Z417 695 aaKnown RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 GGNQ86UU5 652 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIR2DL5AQ8N109 375 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 SPEM1Q8N4L4 309 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 RPP25LQ8N5L8 163 aaKnown RBP4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF645Q8N7E2 425 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 NECAP1Q8NC96 275 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 AGBL5Q8NDL9 886 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR2Y1Q8NGV0 311 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 IL1F10Q8WWZ1 152 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM37Q8WXS4 190 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 RAB1CQ92928 201 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 NINJ1Q92982 152 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 WDYHV1Q96HA8 205 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 MS4A10Q96PG2 267 aa4.2□□□□□ -1.74
HMGB3P16-201ENST00000508037 TAAR6Q96RI8 345 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms