RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FAM53CQ9NYF3 392 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 SIGLEC8Q9NYZ4 499 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 KCNIP1Q9NZI2 227 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 J3QRE1 110 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 FADS2O95864 444 aaKnown RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 APELAP0DMC3 54 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 GTF2F2P13984 249 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 GTF2A1P52655 376 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 PPP3R1P63098 170 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 TATDN3Q17R31 274 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 TMEM30BQ3MIR4 351 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 STEAP3Q658P3 488 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 POC5Q8NA72 575 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 OR2AK2Q8NG84 335 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 IL1F10Q8WWZ1 152 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 MRPL48Q96GC5 212 aaKnown RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 JAM3Q9BX67 310 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 PAK1IP1Q9NWT1 392 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 SLC2A8Q9NY64 477 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 IL36GQ9NZH8 169 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 PEF1Q9UBV8 284 aaKnown RBP6.89□□□□□ -1.31
CCDC171-209ENST00000498725 SLC23A1Q9UHI7 598 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 ENOPH1Q9UHY7 261 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
CCDC171-209ENST00000498725 A0A0G2JLM5 398 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 NUPR2A6NF83 97 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 BAG2O95816 211 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 CD2P06729 351 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 CT45A6P0DMU7 189 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 CT45A5P0DMU8 189 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 CT45A7P0DMV0 189 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 EDN2P20800 178 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 BDKRB2P30411 391 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ALDH3A2P51648 485 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 GBX2P52951 348 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-209ENST00000498725 RPS16P62249 146 aaKnown RBP6.88□□□□□ -1.31
CCDC171-209ENST00000498725 RIPK1Q13546 671 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 FXYD3Q14802 87 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 PSG5Q15238 335 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ATP6AP1Q15904 470 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 C6orf141Q5SZD1 244 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF529Q6P280 563 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-209ENST00000498725 BVESQ8NE79 360 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 GATAD1Q8WUU5 269 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 MUL1Q969V5 352 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 TMEM106AQ96A25 262 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 LGALS12Q96DT0 336 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ABHD14BQ96IU4 210 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF184Q99676 751 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-209ENST00000498725 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 SELENOIQ9C0D9 397 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 JPT1Q9UK76 154 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 POMPQ9Y244 141 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 WASHC3Q9Y3C0 194 aa6.88□□□□□ -1.31
CCDC171-209ENST00000498725 SAC3D1A6NKF1 404 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 H0YJW9 148 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 GYG2O15488 501 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 YPEL1O60688 119 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 CPEP16870 476 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 LINC00205P59089 165 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 DMKNQ6E0U4 476 aaPredicted RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 GLIPR1L1Q6UWM5 242 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 JAGN1Q8N5M9 183 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 OR13C5Q8NGS8 318 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 SETD6Q8TBK2 473 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 MRPL30Q8TCC3 161 aaKnown RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 GALMQ96C23 342 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 YPEL2Q96QA6 119 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 GABARAPL3Q9BY60 117 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 GABARAPL1Q9H0R8 117 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 IFI27L2Q9H2X8 130 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 SPACA1Q9HBV2 294 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 AMBNQ9NP70 447 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 TMEM138Q9NPI0 162 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 RCC2Q9P258 522 aaKnown RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 PEMTQ9UBM1 199 aa6.87□□□□□ -1.31
CCDC171-209ENST00000498725 EXOGQ9Y2C4 368 aaKnown RBP6.87□□□□□ -1.31
CCDC171-209ENST00000498725 A0A0B4J203 849 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 H3BNX3 289 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 SLC22A1O15245 554 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF780AO75290 641 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-209ENST00000498725 CRTAPO75718 401 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-209ENST00000498725 FASP25445 335 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 MC5RP33032 325 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 HTD2P86397 168 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 ZIK1Q3SY52 487 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms