RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 EFCAB10A6NFE3 127 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 UPK1AO00322 258 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 BHLHE40O14503 412 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 GYG2O15488 501 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SLC37A4O43826 429 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PDE6DO43924 150 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 TTRP02766 147 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CRYGDP07320 174 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR56A5P0C7T3 313 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SULT1A3P0DMM9 295 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SULT1A4P0DMN0 295 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CRABP2P29373 138 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 MAP2K4P45985 399 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 MP68P56378 58 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 HLA-DRB3P79483 266 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 FABP5Q01469 135 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SYCNQ0VAF6 134 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 JOSD1Q15040 202 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CCDC153Q494R4 210 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CCDC58Q4VC31 144 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 MESTQ5EB52 335 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 TEX30Q5JUR7 227 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 FAM201AQ5SY85 155 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 HENMT1Q5T8I9 393 aaKnown RBP2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF773Q6PK81 442 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CYHR1Q6ZMK1 362 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 CLEC20AQ6ZU45 233 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF550Q7Z398 422 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 GRINAQ7Z429 371 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 VN1R4Q7Z5H5 301 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 LINC00596Q86U02 117 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 DOLPP1Q86YN1 238 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZNF439Q8NDP4 499 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR4M1Q8NGD0 313 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR51A2Q8NGJ7 313 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR2K2Q8NGT1 345 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR13D1Q8NGV5 346 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 ORAOV1Q8WV07 137 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 LZICQ8WZA0 190 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 RBMXL1Q96E39 390 aaKnown RBP2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 TCEAL4Q96EI5 215 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 ANKRD36BP1Q96IX9 119 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PPP1R2P1Q96PQ5 205 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR7D2Q96RA2 312 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 GINS3Q9BRX5 216 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 GNB1LQ9BYB4 327 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SAMD10Q9BYL1 202 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 TBL1XR1Q9BZK7 514 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 FAM96AQ9H5X1 160 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 RWDD2AQ9UIY3 292 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 BTRCQ9Y297 605 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 SLC35A3Q9Y2D2 325 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 KLF13Q9Y2Y9 288 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR51B4Q9Y5P0 310 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PLA2R1Q13018 1463 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PTPRKQ15262 1439 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 NCOA3Q9Y6Q9 1424 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 PCM1Q15154 2024 aa2.75□□□□□ -1.97
HMGB1P38-201ENST00000490557 IGKV1D-17A0A075B6S4 117 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 EXOC1LA0A1B0GW35 172 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 KRBOX1C9JBD0 128 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 M0QZK8 103 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 FAAHO00519 579 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 ARPC5O15511 151 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 PFDN1O60925 122 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 IGLV3-19P01714 112 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 IL3RAP26951 378 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 RAB2AP61019 212 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 PPP1CAP62136 330 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 RPS24P62847 133 aaKnown RBP2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 SPCS2Q15005 226 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 SSX1Q16384 188 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 CLLU1OSQ5K130 101 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 LCN8Q6JVE9 175 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 TMPPEQ6ZT21 453 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 ATP5L2Q7Z4Y8 100 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 PRNTQ86SH4 94 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 OOSP2Q86WS3 158 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 C20orf196Q8IYI0 205 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 UBL4BQ8N7F7 174 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 ZIC4Q8N9L1 334 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR2M7Q8NG81 312 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 GRPEL2Q8TAA5 225 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 SKA2Q8WVK7 121 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 PTX4Q96A99 478 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 C12orf43Q96C57 262 aaKnown RBP2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 GPER1Q99527 375 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 TSC22D3Q99576 134 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 TBX5Q99593 518 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 CGREF1Q99674 301 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 MARVELD1Q9BSK0 173 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
HMGB1P38-201ENST00000490557 CISHQ9NSE2 258 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms