RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CMSS1Q9BQ75 279 aaKnown RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM246Q9BRR3 403 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 CHST6Q9GZX3 395 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 C11orf54Q9H0W9 315 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 PPA2Q9H2U2 334 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 C16orf95Q9H693 158 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SCPEP1Q9HB40 452 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM165Q9HC07 324 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 TNFRSF19Q9NS68 423 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 RABL2AQ9UBK7 228 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 DNAJB11Q9UBS4 358 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 DKK2Q9UBU2 259 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 RABL2BQ9UNT1 228 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SORL1Q92673 2214 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TANC2Q9HCD6 1990 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TRBV6-6A0A0A6YYG2 114 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 IGKV1-6A0A0C4DH72 117 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 WI2-2373I1.2A0A1W2PRP0 233 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ANKRD20A5PA0PJZ0 165 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 MEX3AA1L020 520 aaKnown RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 MCRIP1C9JLW8 97 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 K7N7A8 449 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 IFNL4K9M1U5 179 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 M0QYG6 137 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 SIGLEC5O15389 551 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 GPR137BO60478 399 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 RBBP9O75884 186 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 JTBO76095 146 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 MT-ND4P03905 459 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 CD74P04233 296 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 CD3DP04234 171 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 GLAP06280 429 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 IRF2P14316 349 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 MUC1P15941 1255 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 DTYMKP23919 212 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 HLA-DMAP28067 261 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 RCVRNP35243 200 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 GLIPR1P48060 266 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 BPIFB3P59826 476 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 BTG1P62324 171 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 AESQ08117 197 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ASAH1Q13510 395 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 MICBQ29980 383 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 HFEQ30201 348 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ATPAF1Q5TC12 328 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TRIQKQ629K1 86 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF57Q68EA5 555 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF497Q6ZNH5 498 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 GDPD3Q7L5L3 318 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 C1orf87Q8N0U7 546 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TOMM5Q8N4H5 51 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TPRX1Q8N7U7 411 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 POC5Q8NA72 575 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM229BQ8NBD8 167 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 OR4F17Q8NGA8 305 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 OR4C16Q8NGL9 310 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 C15orf40Q8WUR7 153 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 FCAMRQ8WWV6 532 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 DDB2Q92466 427 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 RAB1CQ92928 201 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 SDSLQ96GA7 329 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 SNX22Q96L94 193 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 OR4F4Q96R69 305 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 DCTN5Q9BTE1 182 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ST6GALNAC5Q9BVH7 336 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 TINAGL1Q9GZM7 467 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-206ENST00000441089 SPACA1Q9HBV2 294 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 HRASLSQ9HDD0 168 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 Q9N2K0 584 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 C12orf4Q9NQ89 552 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 ETAA1Q9NY74 926 aa3.86□□□□□ -1.79
PTPN4-206ENST00000441089 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 TRAV38-1A0A0B4J264 116 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM30CPA0ZSE6 113 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ISPDA4D126 451 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 LRRC30A6NM36 301 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 MARCH11A6NNE9 402 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CEACAM18A8MTB9 384 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 F5H0A9 414 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 MGST3O14880 152 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 LYRM1O43325 122 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ADAM20O43506 726 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 FSTL3O95633 263 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 PMP2P02689 132 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 TK1P04183 234 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CSN2P05814 226 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 SCTP09683 121 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 GSTT2P0CG29 244 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 GSTT2BP0CG30 244 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CGB3P0DN86 165 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CGB7P0DN87 165 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 IGHV4-38-2P0DP08 117 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 RCC1P18754 421 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 HRH1P35367 487 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 MDH2P40926 338 aaKnown RBP3.85□□□□□ -1.79
PTPN4-206ENST00000441089 CBX5P45973 191 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 TAS2R19P59542 299 aa3.85□□□□□ -1.79
PTPN4-206ENST00000441089 ACTBP60709 375 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms