RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ADPRHL1Q8NDY3 354 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 MRPL37Q9BZE1 423 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR51I2Q9H344 312 aa8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-202ENST00000439374 DEFB108AA8MXU0 73 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 HSPB1P04792 205 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF133P52736 654 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 PCBD1P61457 104 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 ALKBH6Q3KRA9 238 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 CLN8Q9UBY8 286 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 PITPNC1Q9UKF7 332 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 M0R143 59 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 NUPR1O60356 82 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 LYZL6O75951 148 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 GNG10P50151 68 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 ARL16Q0P5N6 197 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 IL13RA2Q14627 380 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 M1APQ8TC57 530 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 Q96M66 194 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 WDR54Q9H977 334 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 CRIM1Q9NZV1 1036 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TUBD1Q9UJT1 453 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRAPPC1Q9Y5R8 145 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR6C6A6NF89 314 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 A8MWP6 167 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TPRX1Q8N7U7 411 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 KDF1Q8NAX2 398 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 RFESDQ8TAC1 157 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 SPSB1Q96BD6 273 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 ADGRG7Q96K78 797 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 DIRC2Q96SL1 478 aa8.48□□□□□ -1.05
CDC42SE1-202ENST00000439374 TNCP24821 2201 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGHV3-43A0A0B4J1X8 118 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 ANKRD30BLA7E2S9 258 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 PDCD6O75340 191 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGHV3-43DP0DP04 118 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 IRF2P14316 349 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 CBLN1P23435 193 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 FUT6P51993 359 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 EIF3IQ13347 325 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 SLC25A53Q5H9E4 307 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 VHLLQ6RSH7 139 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 LHFPL2Q6ZUX7 228 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 LYPD6Q86Y78 171 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM68Q96MH6 324 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF552Q9H707 407 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZDHHC11Q9H8X9 412 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR1A1Q9P1Q5 309 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 COL6A6A6NMZ7 2263 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRAV38-1A0A0B4J264 116 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 A0A0U1RQV5 110 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 CBY3A6NI87 242 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRDCB7Z8K6 153 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 SYNGR3O43761 229 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 CA11O75493 328 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 C1QL4Q86Z23 238 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 MRPL30Q8TCC3 161 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM54Q969K7 222 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 GCM1Q9NP62 436 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 SERTAD4Q9NUC0 356 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 TRAPPC2LQ9UL33 140 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 NUP210LQ5VU65 1888 aa8.47□□□□□ -1.05
CDC42SE1-202ENST00000439374 CLEC18AA5D8T8 446 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 NPIPB13A6NJU9 1138 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 NPIPB4C9JG80 1138 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 SLC17A3O00476 420 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 LILRA1O75019 489 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 CEBPDP49716 269 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 Q6ZRM9 215 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 NUFIP2Q7Z417 695 aaKnown RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM183AQ8IXX5 376 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 CLEC18CQ8NCF0 446 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 GNPNAT1Q96EK6 184 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 TXN2Q99757 166 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 HSPB9Q9BQS6 159 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 OBP2BQ9NPH6 170 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMED3Q9Y3Q3 217 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 CEP295Q9C0D2 2601 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 CYB5R3P00387 301 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 HBE1P02100 147 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 C1QTNF9P0C862 333 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 GCH1P30793 250 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 TNFSF10P50591 281 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 FABP6P51161 128 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 DBX2Q6ZNG2 339 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR2T10Q8NGZ9 312 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 GPR146Q96CH1 333 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms