RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TCAPO15273 167 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 B2MP61769 119 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TEX30Q5JUR7 227 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 M1APQ8TC57 530 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 FAM122AQ96E09 287 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TMEM222Q9H0R3 208 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 IL17BQ9UHF5 180 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TIMM9Q9Y5J7 89 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 ELOA3CA0A087WX78 387 aaPredicted RBP9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 NPIPB9F8W1W9 429 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 M0R143 59 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TIAF1O95411 115 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 IGKV3-11P04433 115 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 COX7A1P24310 79 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TMEM183BQ1AE95 376 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TIPARPQ7Z3E1 657 aaKnown RBP9.29□□□□□ -0.92
CCDC40-204ENST00000397545 MDP1Q86V88 176 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 LRRC75AQ8NAA5 344 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 HIST1H2BAQ96A08 127 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 MOB3AQ96BX8 217 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 PITPNC1Q9UKF7 332 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 BMPR1BO00238 502 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 TMPRSS2O15393 492 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 SLC23A3Q6PIS1 610 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 MOGAT3Q86VF5 341 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 VN1R17PQ8TDU5 208 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 SIRT7Q9NRC8 400 aa9.29□□□□□ -0.92
CCDC40-204ENST00000397545 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 TRAV14DV4A0A0A6YYC5 116 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 A8MXK9 166 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 SNURFLB1AK76 121 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 FAM157AC9JC47 383 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 NDUFB3O43676 98 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 CYC1P08574 325 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 PRF1P14222 555 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 Q6ZN92 141 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 FGF11Q92914 225 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 TMEM56Q96MV1 263 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 PCGF1Q9BSM1 259 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 RNF122Q9H9V4 155 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 MYO18BQ8IUG5 2567 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 B4DEV8 164 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 DLL1O00548 723 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 KLK10O43240 276 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 NDUFB4O95168 129 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 CD8AP01732 235 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 EGR1P18146 543 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 CEBPDP49716 269 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 FDX2Q6P4F2 183 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR4C5Q8NGB2 326 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 RND1Q92730 232 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 BCL2L2Q92843 193 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 DENND4AQ7Z401 1863 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 PITX3O75364 302 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR2J3O76001 311 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 RANP62826 216 aaKnown RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 VMA21Q3ZAQ7 101 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR4A4PQ8NGN8 299 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 RRP8O43159 456 aaKnown RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 TNFRSF1AP19438 455 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 KLF3P57682 345 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 PLAURQ03405 335 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 HIST3H3Q16695 136 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 H1FOOQ8IZA3 346 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 POC1AQ8NBT0 407 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 OR4S2Q8NH73 311 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 GPR146Q96CH1 333 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 DUSP15Q9H1R2 295 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-204ENST00000397545 CXXC4Q9H2H0 198 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 SLC2A8Q9NY64 477 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 TUBD1Q9UJT1 453 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 MYO15AQ9UKN7 3530 aa9.28□□□□□ -0.92
CCDC40-204ENST00000397545 ZNF596Q8TC21 504 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 GUCD1Q96NT3 240 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 MESP1Q9BRJ9 268 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 RTN4RQ9BZR6 473 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 IGHV3-21A0A0B4J1V1 117 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 REG1BP48304 166 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 RPEL1Q2QD12 228 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 HLA-DRB5Q30154 266 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 OR2M7Q8NG81 312 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 OR2T6Q8NHC8 308 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 HS3ST3B1Q9Y662 390 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 OOEPA6NGQ2 149 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms