RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 C1orf100Q5SVJ3 147 aa16.21■□□□□ 0.19
CSPG5-202ENST00000383738 C16orf82Q7Z2V1 217 aa16.21■□□□□ 0.19
CSPG5-202ENST00000383738 GMPPAQ96IJ6 420 aaPredicted RBP16.21■□□□□ 0.19
CSPG5-202ENST00000383738 CDPF1Q6NVV7 123 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 ZNF524Q96C55 264 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 SLC25A6P12236 298 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 SUMO1P63165 101 aaKnown RBP16.2■□□□□ 0.18
CSPG5-202ENST00000383738 TNFAIP6P98066 277 aaPredicted RBP16.2■□□□□ 0.18
CSPG5-202ENST00000383738 MSMO1Q15800 293 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 G6PC2Q9NQR9 355 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 MTCH1Q9NZJ7 389 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 TLN2Q9Y4G6 2542 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BKO60814 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BJP06899 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BOP23527 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BBP33778 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BDP58876 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BCP62807 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST2H2BEQ16778 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BHQ93079 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BNQ99877 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H2BMQ99879 126 aa16.2■□□□□ 0.18
CSPG5-202ENST00000383738 FAM27E3Q08E93 113 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 VAX1Q5SQQ9 334 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 LINC00114Q6XXX2 140 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 UHRF2Q96PU4 802 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 CYTL1Q9NRR1 136 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 CXCL1P09341 107 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 OR3A1P47881 315 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 SMIM21Q3B7S5 101 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 OR10P1Q8NGE3 313 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 RTBDNQ9BSG5 229 aaPredicted RBP16.19■□□□□ 0.18
CSPG5-202ENST00000383738 GRIFINA4D1Z8 144 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 F6UZH7 168 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 GAPDHP04406 335 aaKnown RBP16.19■□□□□ 0.18
CSPG5-202ENST00000383738 TMEM230Q96A57 120 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 KIAA1456Q9P272 454 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 LOC102723996A0A087X1L8 192 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 NKX6-3A6NJ46 265 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 TMPRSS2O15393 492 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 CLPSP04118 112 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 FFAR4Q5NUL3 377 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 FNDC7Q5VTL7 733 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 ZNF441Q8N8Z8 693 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 ST6GALNAC3Q8NDV1 305 aa16.19■□□□□ 0.18
CSPG5-202ENST00000383738 PAGE4O60829 102 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 PDCD6O75340 191 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 DTYMKP23919 212 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 CEBPDP49716 269 aaPredicted RBP16.18■□□□□ 0.18
CSPG5-202ENST00000383738 ROM1Q03395 351 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 BTNL8Q6UX41 500 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 PINX1Q96BK5 328 aaKnown RBP16.18■□□□□ 0.18
CSPG5-202ENST00000383738 ZNF586Q9NXT0 402 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 C16orf97H3BN30 126 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 HOXB1P14653 301 aaPredicted RBP16.18■□□□□ 0.18
CSPG5-202ENST00000383738 HNRNPA3P51991 378 aaKnown RBP16.18■□□□□ 0.18
CSPG5-202ENST00000383738 ZNF107Q9UII5 783 aaPredicted RBP16.18■□□□□ 0.18
CSPG5-202ENST00000383738 PRR27Q6MZM9 219 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 MRGPRFQ96AM1 343 aa16.18■□□□□ 0.18
CSPG5-202ENST00000383738 SOD3P08294 240 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 AMTP48728 403 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 LGALS4P56470 323 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 PLAURQ03405 335 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 DMRTA1Q5VZB9 504 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 OR5D13Q8NGL4 314 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 LPAR2Q9HBW0 351 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 ZNF355PQ9NSJ1 428 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 FAM157CP0CG43 387 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 CD33P20138 364 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 CEACAM6P40199 344 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 LY6DQ14210 128 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 PAQR4Q8N4S7 273 aaPredicted RBP16.17■□□□□ 0.18
CSPG5-202ENST00000383738 ACTR3CQ9C0K3 210 aaPredicted RBP16.17■□□□□ 0.18
CSPG5-202ENST00000383738 FCN1O00602 326 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 SYNGR1O43759 233 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 FCGR3AP08637 254 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 GPR12P47775 334 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 THBS3P49746 956 aa16.17■□□□□ 0.18
CSPG5-202ENST00000383738 BARX1Q9HBU1 254 aaPredicted RBP16.17■□□□□ 0.18
CSPG5-202ENST00000383738 C20orf202A1L168 122 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 PPIHO43447 177 aaKnown RBP16.16■□□□□ 0.18
CSPG5-202ENST00000383738 HIST1H1BP16401 226 aaKnown RBP16.16■□□□□ 0.18
CSPG5-202ENST00000383738 S100A7P31151 101 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 SLC38A11Q08AI6 406 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 OR4C5Q8NGB2 326 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 PSG11Q9UQ72 335 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 DNPH1O43598 174 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 PRAMEF5Q5TYX0 476 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 CMTM2Q8TAZ6 248 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 CHST5Q9GZS9 411 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 WNT5BQ9H1J7 359 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 NAT8BQ9UHF3 227 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 IGKV1D-8A0A087WSZ0 117 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 FSTP19883 344 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 FOXO1Q12778 655 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 Q6ZN92 141 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 CTDSP1Q9GZU7 261 aa16.16■□□□□ 0.18
CSPG5-202ENST00000383738 ARL2-SNX15V9GYD0 113 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms