RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CBLN3Q6UW01 205 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 OR1L8Q8NGR8 309 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 F12P00748 615 aaPredicted RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 PLAUP00749 431 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 SLC25A40Q8TBP6 338 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 MRPL30Q8TCC3 161 aaKnown RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 ALG14Q96F25 216 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 WFIKKN1Q96NZ8 548 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 UQCR10Q9UDW1 63 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 PTPRDP23468 1912 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 IGLV3-16A0A075B6K0 115 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 J3QR06 171 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 FFAR1O14842 300 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 LGALS3P17931 250 aaKnown RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 CKS2P33552 79 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 SOX8P57073 446 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 SAMD13Q5VXD3 122 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 EAF1Q96JC9 268 aaPredicted RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 MRPL16Q9NX20 251 aaKnown RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 CLPPQ16740 277 aaPredicted RBP10.9□□□□□ -0.66
HCFC1-202ENST00000369984 MESTQ5EB52 335 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 ROM1Q03395 351 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 MSRB3Q8IXL7 192 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 DDA1Q9BW61 102 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.67
HCFC1-202ENST00000369984 CD74P04233 296 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 KLF9Q13886 244 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 ASB5Q8WWX0 329 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 ZNF665Q9H7R5 613 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 AGFG2O95081 481 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 IL4P05112 153 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 KIAA0040Q15053 153 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 H1FOOQ8IZA3 346 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 NFAM1Q8NET5 270 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 ZNF71Q9NQZ8 489 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 GZMHP20718 246 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 EIF3IQ13347 325 aaKnown RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 TMEM70Q9BUB7 260 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 LINC00862A6NCI5 91 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 EBLN2Q6P2I7 272 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 CDX2Q99626 313 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 Q6ZS52 159 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 RBM38Q9H0Z9 239 aaKnown RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 LRRK1Q38SD2 2015 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 ZNF324BQ6AW86 544 aaPredicted RBP10.89□□□□□ -0.67
HCFC1-202ENST00000369984 TRBV23-1A0A0A0MS06 115 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 CKS1BP61024 79 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 SERGEFQ9UGK8 458 aa10.89□□□□□ -0.67
HCFC1-202ENST00000369984 EP300Q09472 2414 aaPredicted RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 DDTP30046 118 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 PGLYRP3Q96LB9 341 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 GEMIN7Q9H840 131 aaKnown RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 MAS1LP35410 378 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 SDK2Q58EX2 2172 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 CDC42EP3Q9UKI2 254 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ZNF831Q5JPB2 1677 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 LIPT2A6NK58 231 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 VCX2Q9H322 139 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 JKAMPQ9P055 326 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 KBTBD11O94819 623 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 TM4SF20Q53R12 229 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 OR10J6PQ8NGY7 276 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 HKR1P10072 659 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ZNF250P15622 560 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 EPHA8P29322 1005 aaPredicted RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ABHD14BQ96IU4 210 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ANAPC13Q9BS18 74 aa10.88□□□□□ -0.67
HCFC1-202ENST00000369984 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
HCFC1-202ENST00000369984 ATP6V0CP27449 155 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 ZBTB34Q8NCN2 500 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 CGB1A6NKQ9 187 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 A8MWL6 223 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 SLC25A20O43772 301 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 MAGEA5P43359 124 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 WDR25Q64LD2 544 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-202ENST00000369984 RECKO95980 971 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 CYB5R3P00387 301 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-202ENST00000369984 BCL2P10415 239 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 C3AR1Q16581 482 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 HIKESHIQ53FT3 197 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 OR13C6PQ8NH95 151 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
HCFC1-202ENST00000369984 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
HCFC1-202ENST00000369984 REG1BP48304 166 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms