RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TMEM267Q0VDI3 215 aaPredicted RBP1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 MRPL51Q4U2R6 128 aaKnown RBP1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR8K1Q8NGG5 319 aa1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR10D4PQ8NGN7 298 aa1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 ARL5BQ96KC2 179 aa1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR51B6Q9H340 312 aa1.77□□□□□ -2.13
RNU6-28P-201ENST00000362378 PTPRJQ12913 1337 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 CHD2O14647 1828 aaKnown RBP1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 E7EQL1 145 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 DEDDO75618 318 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 CRYGDP07320 174 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR4A8P0C604 315 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 OCM2P0CE71 109 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 CXCL2P19875 107 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 CXCL3P19876 107 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 HPCAP84074 193 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 MLLT11Q13015 90 aaPredicted RBP1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 EBPQ15125 230 aaKnown RBP1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 MFSD8Q8NHS3 518 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 GPR119Q8TDV5 335 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 TMBIM1Q969X1 311 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 TIPINQ9BVW5 301 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 PARVGQ9HBI0 331 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 MRPL16Q9NX20 251 aaKnown RBP1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 USE1Q9NZ43 259 aa1.76□□□□□ -2.13
RNU6-28P-201ENST00000362378 ABCC11Q96J66 1382 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 LOC102725191A0A1B0GVB3 256 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 C17orf98A8MV24 154 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 G3V3Q6 166 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 TP53I11O14683 189 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 SSNA1O43805 119 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 DEXIO95424 95 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 IL6P05231 212 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 CTSGP08311 255 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 CD7P09564 240 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 NQO1P15559 274 aaKnown RBP1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 PPP1CCP36873 323 aaKnown RBP1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 GZMMP51124 257 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 DAPP51397 102 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 SNAP25P60880 206 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 CXCR4P61073 352 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 HERVK_113P63121 156 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 FABP5Q01469 135 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 MEF2BQ02080 365 aaPredicted RBP1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 CDKL4Q5MAI5 379 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 ATP5L2Q7Z4Y8 100 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 MSRB3Q8IXL7 192 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 CCDC112Q8NEF3 446 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR2V1Q8NHB1 315 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 TBX5Q99593 518 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 DERL2Q9GZP9 239 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 C11orf1Q9H5F2 150 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 HHLA2Q9UM44 414 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 HDGFL3Q9Y3E1 203 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 HEY1Q9Y5J3 304 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 ALG5Q9Y673 324 aa1.75□□□□□ -2.13
RNU6-28P-201ENST00000362378 SHANK3Q9BYB0 1731 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 TRPM3Q9HCF6 1732 aaPredicted RBP1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 TRAV8-1A0A0A6YYK1 113 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 MRASO14807 208 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 SLC16A4O15374 487 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 NIPSNAP2O75323 286 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 HLA-DRAP01903 254 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 APOEP02649 317 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 ATP6V0CP27449 155 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR10J1P30954 320 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 CDC34P49427 236 aaPredicted RBP1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 RPS24P62847 133 aaKnown RBP1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 HTR4Q13639 388 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 TNFAIP8L2Q6P589 184 aaPredicted RBP1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 DNAAF3Q8N9W5 541 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 ERMNQ8TAM6 284 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 HAVCR2Q8TDQ0 301 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 Q8WTZ3 238 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 CDCA4Q9BXL8 241 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 TRIOBPQ9H2D6 2365 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 THSD7AQ9UPZ6 1657 aa1.74□□□□□ -2.13
RNU6-28P-201ENST00000362378 DHRS12A0PJE2 317 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 M0QZ92 97 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 CXCR6O00574 342 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 PFDN6O15212 129 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 ZNF73O43830 326 aaPredicted RBP1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 TYMSP04818 313 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 NPPCP23582 126 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 CA7P43166 264 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 BLVRAP53004 296 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 TSPEAR-AS2P59090 65 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 PSG4Q00888 419 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 FAM229BQ4G0N7 80 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 CST9Q5W186 159 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 ZNF567Q8N184 647 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 CAPZA3Q96KX2 299 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 C16orf95Q9H693 158 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 TAS2R9Q9NYW1 312 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 EMC3Q9P0I2 261 aa1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 PCYT1BQ9Y5K3 369 aaPredicted RBP1.73□□□□□ -2.13
RNU6-28P-201ENST00000362378 HSPE1-MOB4S4R3N1 261 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms