RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 COX5AP20674 150 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 KIR2DS4P43632 304 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 KIR2DS1Q14954 304 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 IZUMO4Q1ZYL8 232 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 Q3ZCU0 254 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 ZNF429Q86V71 674 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 CYB561D1Q8N8Q1 229 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 ST8SIA3O43173 380 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 Q6ZR03 302 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 OR10J5Q8NHC4 309 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 PLSCR4Q9NRQ2 329 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 TRAPPC2LQ9UL33 140 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 PROCRQ9UNN8 238 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 TIMM8AO60220 97 aaPredicted RBP18.49■□□□□ 0.55
TPM4-201ENST00000300933 ZNF695Q8IW36 515 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 TMEM222Q9H0R3 208 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 ZNF71Q9NQZ8 489 aaPredicted RBP18.49■□□□□ 0.55
TPM4-201ENST00000300933 CHD3Q12873 2000 aaKnown RBP18.49■□□□□ 0.55
TPM4-201ENST00000300933 ST8SIA5O15466 376 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 PSPNO60542 156 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 ATP6V0CP27449 155 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 EWSR1Q01844 656 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■■□□ 16.2
TPM4-201ENST00000300933 HIST3H2BBQ8N257 126 aa18.49■□□□□ 0.55
TPM4-201ENST00000300933 IQCF6A8MYZ5 107 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 ZNF83P51522 516 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 ERVK11-1P61568 191 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 TPRX1Q8N7U7 411 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 IGHV1-18A0A0C4DH31 117 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 AHRRA9YTQ3 701 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 TUSC2O75896 110 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 DDTP30046 118 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 CXorf66Q5JRM2 361 aaPredicted RBP18.48■□□□□ 0.55
TPM4-201ENST00000300933 SPSB3Q6PJ21 355 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 Q6ZS49 121 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 DUSP13Q9UII6 198 aa18.48■□□□□ 0.55
TPM4-201ENST00000300933 A0A087X0M5 115 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 A0A1B0GX30 115 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 SRP19P09132 144 aaKnown RBP18.47■□□□□ 0.55
TPM4-201ENST00000300933 PGA5P0DJD9 388 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 IL13RA2Q14627 380 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 IGF2-ASQ6U949 168 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 LRP11Q86VZ4 500 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 HSPA12AO43301 675 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 ADAM20O43506 726 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 CGAP01215 116 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 HLA-DRB3P79483 266 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 GNMTQ14749 295 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 VHLLQ6RSH7 139 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 C11orf53Q8IXP5 236 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 RBMXL3Q8N7X1 1067 aaKnown RBP18.47■□□□□ 0.55
TPM4-201ENST00000300933 LRTM2Q8N967 370 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 PPP1R3CQ9UQK1 317 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 POLDIP2Q9Y2S7 368 aa18.47■□□□□ 0.55
TPM4-201ENST00000300933 TRGC1P0CF51 173 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 RTP5Q14D33 572 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 MSMPQ1L6U9 139 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 ZNF324BQ6AW86 544 aaPredicted RBP18.46■□□□□ 0.55
TPM4-201ENST00000300933 SELENOHQ8IZQ5 122 aaKnown RBP18.46■□□□□ 0.55
TPM4-201ENST00000300933 POM121Q96HA1 1249 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 RBM7Q9Y580 266 aaKnown RBP18.46■□□□□ 0.55
TPM4-201ENST00000300933 FAM215AQ9Y5M1 114 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 OR5H1A6NKK0 313 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 PGLYRP1O75594 196 aaPredicted RBP18.46■□□□□ 0.55
TPM4-201ENST00000300933 EPHA1P21709 976 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 BHLHA15Q7RTS1 189 aaPredicted RBP18.46■□□□□ 0.55
TPM4-201ENST00000300933 OR8G5Q8NG78 346 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 FRZBQ92765 325 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 USF3Q68DE3 2245 aa18.46■□□□□ 0.55
TPM4-201ENST00000300933 IGHV2OR16-5A0A0B4J2B6 119 aa18.46■□□□□ 0.54
TPM4-201ENST00000300933 ZNF474Q6S9Z5 364 aaPredicted RBP18.46■□□□□ 0.54
TPM4-201ENST00000300933 BOD1Q96IK1 185 aa18.46■□□□□ 0.54
TPM4-201ENST00000300933 NIPSNAP3BQ9BS92 247 aa18.46■□□□□ 0.54
TPM4-201ENST00000300933 UNKLQ9H9P5 680 aaKnown RBP18.46■□□□□ 0.54
TPM4-201ENST00000300933 METRNQ9UJH8 293 aa18.46■□□□□ 0.54
TPM4-201ENST00000300933 WSB1Q9Y6I7 421 aa18.46■□□□□ 0.54
TPM4-201ENST00000300933 TLN1Q9Y490 2541 aaKnown RBP18.46■□□□□ 0.54
TPM4-201ENST00000300933 A0A1B0GW64 132 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 ZNF16P17020 682 aaPredicted RBP18.45■□□□□ 0.54
TPM4-201ENST00000300933 RUNX1Q01196 453 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 AESQ08117 197 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 ASCL5Q7RTU5 278 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 REC114Q7Z4M0 266 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 TMEM217Q8N7C4 229 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 ABHD5Q8WTS1 349 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 OR2W1Q9Y3N9 320 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 SPTA1P02549 2419 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 HAND1O96004 215 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 MDKP21741 143 aaPredicted RBP18.45■□□□□ 0.54
TPM4-201ENST00000300933 LINC00596Q86U02 117 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 OR2C3Q8N628 320 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 TVP23CQ96ET8 276 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 RNF150Q9ULK6 438 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 TMED3Q9Y3Q3 217 aa18.45■□□□□ 0.54
TPM4-201ENST00000300933 ZZEF1O43149 2961 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 NBASA2RRP1 2371 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 IGSF23A1L1A6 192 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 BTBD17A6NE02 478 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 SH2D1BO14796 132 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 ICAM4Q14773 271 aa18.44■□□□□ 0.54
TPM4-201ENST00000300933 ZNF497Q6ZNH5 498 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms