RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	SIX1	Q15475	284 aa	Predicted RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	C6orf99	Q4VX62	202 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	OCIAD2	Q56VL3	154 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	DNLZ	Q5SXM8	178 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	IBA57	Q5T440	356 aa	Known RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	REG3G	Q6UW15	175 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	ATP5L2	Q7Z4Y8	100 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	VN1R4	Q7Z5H5	301 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	DAZ4	Q86SG3	579 aa	Known RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	TMEM86A	Q8N2M4	240 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	RFLNB	Q8N5W9	214 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	METTL27	Q8N6F8	245 aa	Predicted RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF615	Q8N8J6	731 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	OR5A1	Q8NGJ0	315 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	OR1L1	Q8NH94	360 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	NTN5	Q8WTR8	489 aa	Predicted RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	MALSU1	Q96EH3	234 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	ATXN7L3B	Q96GX2	97 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	TMEM101	Q96IK0	257 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	TP53RK	Q96S44	253 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	CDK5RAP2	Q96SN8	1893 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	SMIM3	Q9BZL3	60 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	LINC00470	Q9BZP3	86 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	OR2D2	Q9H210	308 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	VCX	Q9H320	206 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	DAZ1	Q9NQZ3	744 aa	Known RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	DAZ3	Q9NR90	486 aa	Known RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	RERE	Q9P2R6	1566 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	DHCR7	Q9UBM7	475 aa	Known RBP	4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	SLC23A2	Q9UGH3	650 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	ERG28	Q9UKR5	140 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	HEBP2	Q9Y5Z4	205 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	PXMP4	Q9Y6I8	212 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	ENPP4	Q9Y6X5	453 aa		4.08	□□□□□ -1.76
PAF1-208	ENST00000598594	PHIP	Q8WWQ0	1821 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	ROBO3	Q96MS0	1386 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	MED23	Q9ULK4	1368 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	hCG_1818297	A0A087WSY0	165 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	TRAV9-2	A0A087WT02	112 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	IGHV1-69D	A0A0B4J2H0	117 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	CIB4	A0PJX0	185 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	C5orf63	A6NC05	138 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594		A8MT66	165 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	C16orf97	H3BN30	126 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	HLA-DRB1	P01911	266 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	KDELR1	P24390	212 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	CMPK1	P30085	196 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	SRI	P30626	198 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	S100A11	P31949	105 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	HSPA9	P38646	679 aa	Known RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	LHX2	P50458	406 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	POLR2H	P52434	150 aa	Known RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	TAS2R30	P59541	319 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	FKBP3	Q00688	224 aa	Known RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	HIST1H1A	Q02539	215 aa	Predicted RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	BTN1A1	Q13410	526 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	HTR4	Q13639	388 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	KIAA0087	Q14695	138 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF146	Q15072	292 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	C12orf74	Q32Q52	190 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	MORN5	Q5VZ52	161 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	CXCL17	Q6UXB2	119 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594		Q6ZRU5	148 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	DEFB128	Q7Z7B8	93 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	BAP18	Q8IXM2	172 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	EXOC3-AS1	Q8N2X6	119 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	LINC00337	Q8N6G1	96 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	STPG4	Q8N801	248 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	LY6G5B	Q8NDX9	201 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	OR13C8	Q8NGS7	320 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	OR5K1	Q8NHB7	308 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	RXFP4	Q8TDU9	374 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	TAF15	Q92804	592 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	NEURL3	Q96EH8	262 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	FCRL1	Q96LA6	429 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	LXN	Q9BS40	222 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	KRTAP17-1	Q9BYP8	105 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	LPAR5	Q9H1C0	372 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	GPR84	Q9NQS5	396 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	SPHK2	Q9NRA0	654 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	TMEM38B	Q9NVV0	291 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	TMEM216	Q9P0N5	145 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594	KIAA1671	Q9BY89	1806 aa		4.07	□□□□□ -1.76
PAF1-208	ENST00000598594		A0A087WUU8	490 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	IGKV1-8	A0A0C4DH67	115 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594		A0A0G2JN53	185 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594		H3BSA7	217 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	MRAS	O14807	208 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF354A	O60765	605 aa	Predicted RBP	4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	C8G	P07360	202 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	SOD3	P08294	240 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	OR12D1	P0DN82	309 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	LAMP1	P11279	417 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	CERS1	P27544	350 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	G6PC	P35575	357 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	EVX1	P49640	407 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	ZNF138	P52744	262 aa		4.06	□□□□□ -1.76
PAF1-208	ENST00000598594	SELENOW	P63302	87 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms