RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.65
SCAF1-203ENST00000598359 OPN1MWP04001 364 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 SNRNP70P08621 437 aaKnown RBP10.96□□□□□ -0.65
SCAF1-203ENST00000598359 OPN1MW2P0DN77 364 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 OPN1MW3P0DN78 364 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 IGHV3-43DP0DP04 118 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 GTF2F2P13984 249 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 SPNP16150 400 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 MNDAP41218 407 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 RFX2P48378 723 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 KCNJ3P48549 501 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 ARHGDIBP52566 201 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 PAX5Q02548 391 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 HNF4GQ14541 408 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 AWAT2Q6E213 333 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 Q8N402 240 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 DRAM1Q8N682 238 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 TMEM104Q8NE00 496 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 ARL11Q969Q4 196 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 CREB3L1Q96BA8 519 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 R3HDM4Q96D70 268 aa10.96□□□□□ -0.65
SCAF1-203ENST00000598359 RBMXL1Q96E39 390 aaKnown RBP10.96□□□□□ -0.65
SCAF1-203ENST00000598359 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 H3BUI4 141 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 PLA2G10O15496 165 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 MT-ND4P03905 459 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
SCAF1-203ENST00000598359 REG1BP48304 166 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 MADCAM1Q13477 382 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 MPV17LQ2QL34 196 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 TCTEX1D4Q5JR98 221 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF497Q6ZNH5 498 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 C16orf82Q7Z2V1 217 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 LINC00596Q86U02 117 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 LYPD6Q86Y78 171 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 CADM3Q8N126 398 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 OR10X1Q8NGY0 326 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 AKR1E2Q96JD6 320 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 SELENOIQ9C0D9 397 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 ABCG5Q9H222 651 aa10.95□□□□□ -0.66
SCAF1-203ENST00000598359 AMMECR1Q9Y4X0 333 aaPredicted RBP10.95□□□□□ -0.66
SCAF1-203ENST00000598359 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 SDCBPO00560 298 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 GSTZ1O43708 216 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF780AO75290 641 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 CRTAPO75718 401 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 PITPNAQ00169 270 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 HES1Q14469 280 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 RAB12Q6IQ22 244 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 NRARPQ7Z6K4 114 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 CENPVQ7Z7K6 275 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 OR4K15Q8NH41 348 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 FAM46BQ96A09 425 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 C11orf54Q9H0W9 315 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
SCAF1-203ENST00000598359 RCC2Q9P258 522 aaKnown RBP10.94□□□□□ -0.66
SCAF1-203ENST00000598359 RYR3Q15413 4870 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 UBE2QL1A1L167 161 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A9PA6NNJ1 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 SLC31A2O15432 143 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 FAM106CPP0CH98 169 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 MGMTP16455 207 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 TMEM11P17152 192 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 GZMHP20718 246 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 CD83Q01151 205 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 GPR176Q14439 515 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 HES5Q5TA89 166 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 OR10K2Q6IF99 312 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 PRR18Q8N4B5 295 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 OR10A7Q8NGE5 316 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 OR1L1Q8NH94 360 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 KCNK15Q9H427 330 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 RHBDL2Q9NX52 303 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 STEAP1Q9UHE8 339 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 MOB4Q9Y3A3 225 aa10.93□□□□□ -0.66
SCAF1-203ENST00000598359 A0A0B4J203 849 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 MCRIP1C9JLW8 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms