RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 HOXA6P31267 233 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 MDH2P40926 338 aaKnown RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 FOXG1P55316 489 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 FGF12P61328 243 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 SLC10A1Q14973 349 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 SPINK9Q5DT21 86 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 Q5PR19 223 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 H1FOOQ8IZA3 346 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 CLEC18CQ8NCF0 446 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 ZNF552Q9H707 407 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 ATP23Q9Y6H3 246 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 IGKV1-6A0A0C4DH72 117 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 H0Y980 276 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 KRASP01116 189 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 PAX9P55771 341 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 MLF1P58340 268 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 Q6ZRM9 215 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 C16orf82Q7Z2V1 217 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 MRPL41Q8IXM3 137 aaKnown RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 OR5D13Q8NGL4 314 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 OR4C12Q96R67 309 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 GPR87Q9BY21 358 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 OR2W1Q9Y3N9 320 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 TTC28Q96AY4 2481 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 CHD3Q12873 2000 aaKnown RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 CA6P23280 308 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 RTP5Q14D33 572 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 ASCL4Q6XD76 172 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 OR10A7Q8NGE5 316 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 OR10V1Q8NGI7 309 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF716A6NP11 495 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 CD55P08174 381 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SLC38A11Q08AI6 406 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 C20orf204Q6ZNR8 217 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 HLA-CQ95604 372 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 C12orf49Q9H741 205 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 TUBG2Q9NRH3 451 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 IL36GQ9NZH8 169 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 PRSS50Q9UI38 385 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 EXPH5Q8NEV8 1989 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 B4DEV8 164 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SYNGR4O95473 234 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF705DP0CH99 300 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF705BP0CI00 300 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ARL16Q0P5N6 197 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF816Q0VGE8 651 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 TMEM241Q24JQ0 296 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SPEM1Q8N4L4 309 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF709Q8N972 641 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 KCNE4Q8WWG9 221 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 DNASE2BQ8WZ79 361 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 LOC102724200A0A096LPH7 203 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 OPN1MWP04001 364 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 APLNRP35414 380 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 PSMB3P49720 205 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 PNRC1Q12796 327 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SPINK14Q6IE38 97 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 TUSC5Q8IXB3 177 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 FAM58AQ8N1B3 248 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 OR8G5Q8NG78 346 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 M1APQ8TC57 530 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 PLA2G3Q9NZ20 509 aa10.08□□□□□ -0.8
ABCA3-203ENST00000563623 A0A1B0GU03 582 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 AQP7O14520 342 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 DKK1O94907 266 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 CHRNA7P36544 502 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 GALR1P47211 349 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 C3AR1Q16581 482 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 BSXQ3C1V8 233 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 ODF3L1Q8IXM7 274 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 USF3Q68DE3 2245 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 IL2RGP31785 369 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 CYB561P49447 251 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 PLGLB1Q02325 96 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 OR2Y1Q8NGV0 311 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 OR4X1Q8NH49 305 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 PLPPR1Q8TBJ4 325 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 TECTBQ96PL2 329 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms