RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
LRRC28-216ENST00000559819 KDF1Q8NAX2 398 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-216ENST00000559819 CLDND2Q8NHS1 167 aa8.46□□□□□ -1.06
LRRC28-216ENST00000559819 KLF14Q8TD94 323 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-216ENST00000559819 RAB39BQ96DA2 213 aa8.46□□□□□ -1.06
LRRC28-216ENST00000559819 LOXL4Q96JB6 756 aa8.46□□□□□ -1.06
LRRC28-216ENST00000559819 CLCF1Q9UBD9 225 aa8.46□□□□□ -1.06
LRRC28-216ENST00000559819 IQCF6A8MYZ5 107 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RAMP3O60896 148 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 AESQ08117 197 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 EIF2S3LQ2VIR3 472 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 Q6ZR03 302 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF525Q8N782 197 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TPRX1Q8N7U7 411 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RAB40CQ96S21 281 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TUBA4BQ9H853 241 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 MBNL3Q9NUK0 354 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 UFSP2Q9NUQ7 469 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TREM2Q9NZC2 230 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 METRNQ9UJH8 293 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 WIPI2Q9Y4P8 454 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 BDP1A6H8Y1 2624 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZFHX4Q86UP3 3567 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 DFFBO76075 338 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 OR2C1O95371 312 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 SLC25A6P12236 298 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RAC2P15153 192 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 MEOX2P50222 304 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RPL30P62888 115 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF816Q0VGE8 651 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RNF212Q495C1 297 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 SPANXN5Q5MJ07 72 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 LCN15Q6UWW0 184 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 Q8IYB0 196 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 FDCSPQ8NFU4 85 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 OR8G5Q8NG78 346 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 RPRMQ9NS64 109 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 LIN7CQ9NUP9 197 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 GNG13Q9P2W3 67 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 GTF3C1Q12789 2109 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 C5orf52A6NGY3 159 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 C12orf77C9JDV5 145 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 IFNA4P05014 189 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 S100A6P06703 90 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 WT1P19544 449 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TGFBR3Q03167 851 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TLE4Q04727 773 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 FOXF2Q12947 444 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 TRIP6Q15654 476 aaKnown RBP8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF506Q5JVG8 444 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF343Q6P1L6 599 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 BTNL3Q6UXE8 466 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 FAM214BQ7L5A3 538 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF429Q86V71 674 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 FGFRL1Q8N441 504 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF561Q8N587 486 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 C9orf106Q8NAJ2 232 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 OR2D2Q9H210 308 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 MMP24Q9Y5R2 645 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 WSB1Q9Y6I7 421 aa8.45□□□□□ -1.06
LRRC28-216ENST00000559819 KIAA2026Q5HYC2 2103 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 WNT2P09544 360 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 TAGLN2P37802 199 aaKnown RBP8.44□□□□□ -1.06
LRRC28-216ENST00000559819 ELLP55199 621 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-216ENST00000559819 LINC00205P59089 165 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 UBE2KP61086 200 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 SLC16A13Q7RTY0 426 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 SCGB1C1Q8TD33 95 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 MRGPRDQ8TDS7 321 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF665Q9H7R5 613 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 MSL2Q9HCI7 577 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 PRR14LQ5THK1 2151 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 LOC400499M0QZD8 3231 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 IGHV3-43A0A0B4J1X8 118 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 LOC102723971A0A1B0GUV8 181 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 ZFP92A6NM28 416 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 IGHV3-43DP0DP04 118 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 G6PCP35575 357 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 FABP9Q0Z7S8 132 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 OR8G2PQ6IF36 304 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 WDR31Q8NA23 367 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 MUCL1Q96DR8 90 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 COQ2Q96H96 371 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 RBKSQ9H477 322 aa8.44□□□□□ -1.06
LRRC28-216ENST00000559819 TMEM30CPA0ZSE6 113 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 J3QW42 95 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 PTBP3O95758 552 aaKnown RBP8.43□□□□□ -1.06
LRRC28-216ENST00000559819 KRASP01116 189 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 HBZP02008 142 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF806P0C7X5 589 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 NQO2P16083 231 aa8.43□□□□□ -1.06
LRRC28-216ENST00000559819 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-216ENST00000559819 FABP6P51161 128 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms