RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 A0A1W2PPH5 198 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 ZNF729A6NN14 1252 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-208ENST00000553868 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 NDUFS8O00217 210 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 IL5P05113 134 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 UCP3P55916 312 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 RPL31P62899 125 aaKnown RBP11.91□□□□□ -0.5
SHMT2-208ENST00000553868 HTD2P86397 168 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 HERPUD1Q15011 391 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 TATDN3Q17R31 274 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 C11orf91Q3C1V1 193 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 METTL11BQ5VVY1 283 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 ZNF660Q6AZW8 331 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-208ENST00000553868 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 MARCH1Q8TCQ1 289 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 H1FXQ92522 213 aaKnown RBP11.91□□□□□ -0.5
SHMT2-208ENST00000553868 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-208ENST00000553868 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 CTSZQ9UBR2 303 aa11.91□□□□□ -0.5
SHMT2-208ENST00000553868 IGKV1-6A0A0C4DH72 117 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 A0A1B0GVG6 124 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 TUSC2O75896 110 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 RGS11O94810 467 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 PPYP01298 95 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 WNT2P09544 360 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 AADACP22760 399 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 NFYAP23511 347 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 RAB25P57735 213 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 UBE2MP61081 183 aaKnown RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 OR1L1Q8NH94 360 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 DACT3Q96B18 629 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 RAB39BQ96DA2 213 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.5
SHMT2-208ENST00000553868 CLN8Q9UBY8 286 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 JPT1Q9UK76 154 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 FLVCR2Q9UPI3 526 aa11.9□□□□□ -0.5
SHMT2-208ENST00000553868 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 CTSDP07339 412 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-208ENST00000553868 S100GP29377 79 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 SSTR5P35346 364 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 FXYD4P59646 89 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 TOMM40LQ969M1 308 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-208ENST00000553868 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF747Q9BV97 191 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 OR2S2Q9NQN1 319 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 GPR132Q9UNW8 380 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
SHMT2-208ENST00000553868 A0A0A6YYJ9 748 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 SNRPGP15A8MWD9 76 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 F5H0A9 414 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-208ENST00000553868 F2RL2O00254 374 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CGB3P0DN86 165 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CGB7P0DN87 165 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CEACAM6P40199 344 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 BCAP31P51572 246 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 LUMP51884 338 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-208ENST00000553868 GNB2P62879 340 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 ABCA11PQ4W5N1 156 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 ESCO2Q56NI9 601 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CD276Q5ZPR3 534 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-208ENST00000553868 SLC25A42Q86VD7 318 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 OR52M1Q8NGK5 317 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 EDARADDQ8WWZ3 215 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 MRGPRFQ96AM1 343 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 C19orf12Q9NSK7 152 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 RDH8Q9NYR8 311 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 OR1A1Q9P1Q5 309 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
SHMT2-208ENST00000553868 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
SHMT2-208ENST00000553868 CREBL2O60519 120 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-208ENST00000553868 C4orf46Q504U0 113 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 TMEM200BQ69YZ2 307 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms