RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CDC42P60953 191 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 APOFQ13790 326 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 KLF5Q13887 457 aaPredicted RBP3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ANKRD55Q3KP44 614 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 KLHL12Q53G59 568 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 CEP78Q5JTW2 689 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 TEX30Q5JUR7 227 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF684Q5T5D7 378 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 PRAMEF5Q5TYX0 476 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 GGNBP1Q5YKI7 109 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 SIGIRRQ6IA17 410 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 FAHD1Q6P587 224 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 DHRSXQ8N5I4 330 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF645Q8N7E2 425 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 TCTEX1D1Q8N7M0 179 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 POM121L12Q8N7R1 296 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 TPRX1Q8N7U7 411 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 MINDY2Q8NBR6 621 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 SYT8Q8NBV8 401 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 PROKR2Q8NFJ6 384 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 OR10X1Q8NGY0 326 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 OR4K13Q8NH42 304 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 CYGBQ8WWM9 190 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 HPSE2Q8WWQ2 592 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 SLAMF9Q96A28 289 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 PRRC1Q96M27 445 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF488Q96MN9 340 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZCCHC4Q9H5U6 513 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF556Q9HAH1 456 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF286AQ9HBT8 521 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 HES4Q9HCC6 221 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 PLSCR3Q9NRY6 295 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF355PQ9NSJ1 428 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 MRPL22Q9NWU5 206 aaKnown RBP3.87□□□□□ -1.79
CKAP4-203ENST00000553039 RHCGQ9UBD6 479 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ENOPH1Q9UHY7 261 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 PLECQ15149 4684 aaKnown RBP3.87□□□□□ -1.79
CKAP4-203ENST00000553039 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 A0A087WUU8 490 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 IGHV1-3A0A0C4DH29 117 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 A0A0G2JLM5 398 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 C13orf42A0A1B0GVH6 325 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 A0A1W2PPI3 338 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TVP23AA6NH52 213 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ACOD1A6NK06 481 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF729A6NN14 1252 aaPredicted RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 G3V318 75 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 M0R2N4 97 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 HSPB6O14558 160 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 CDC42EP2O14613 210 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 SH2D1BO14796 132 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 CCNB2O95067 398 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 NDUFB4O95168 129 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TNFAIP8O95379 198 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 H1F0P07305 194 aaKnown RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 LYNP07948 512 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 H2BFMP0C1H6 154 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 RBMY1CP0DJD4 496 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 P0DMU3 169 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ANXA8P13928 327 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ACKR3P25106 362 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 C21orf33P30042 268 aaPredicted RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 IFNGR2P38484 337 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 PTGFRP43088 359 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 YAP1P46937 504 aaKnown RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ERVK11-1P61568 191 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ADARB1P78563 741 aaKnown RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 EWSR1Q01844 656 aaKnown RBP eCLIP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF816Q0VGE8 651 aaPredicted RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 PPP1R8Q12972 351 aaKnown RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 IL24Q13007 206 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GUCA2BQ16661 112 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 MICAQ29983 383 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 MRGPRG-AS1Q2M3A8 158 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GAGE2EQ4V326 116 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TTC23Q5W5X9 447 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 PLCXD3Q63HM9 321 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 KDM4DQ6B0I6 523 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 PRR27Q6MZM9 219 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GAGE2AQ6NT46 116 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TBPL2Q6SJ96 375 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TCF23Q7RTU1 214 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 TMEM179BQ7Z7N9 219 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 ELMOD2Q8IZ81 293 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 OFCC1Q8IZS5 231 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 HS3ST5Q8IZT8 346 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 C8orf59Q8N0T1 100 aaPredicted RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 LINC00471Q8N535 108 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 Q8N6K4 173 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 OR10G2Q8NGC3 310 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 OR52J3Q8NH60 311 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GIPC3Q8TF64 312 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 EMG1Q92979 244 aaKnown RBP3.86□□□□□ -1.79
CKAP4-203ENST00000553039 C18orf15Q96N68 181 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 GFI1Q99684 422 aa3.86□□□□□ -1.79
CKAP4-203ENST00000553039 DGCR6LQ9BY27 220 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms