RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 J3QRK9 145 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 SPINT2O43291 252 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 SSX5O60225 188 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 NAPSAO96009 420 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 GZMHP20718 246 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 GDNFP39905 211 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 OR3A3P47888 321 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 TAS2R19P59542 299 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 PAX5Q02548 391 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 HOGA1Q86XE5 327 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 GVQW1Q8N7I0 195 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF714Q96N38 554 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 NCOR1P1Q9H4R4 102 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 Q9N2K0 584 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 C19orf12Q9NSK7 152 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 MTFP1Q9UDX5 166 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 UBE2J1Q9Y385 318 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 LINC00312Q9Y6C7 94 aa10.12□□□□□ -0.79
CLSTN3-208ENST00000538933 TRBV6-6A0A0A6YYG2 114 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 hCG_1809904A0A1W2PP81 198 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 A0A1W2PPE2 198 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 A0A1W2PR64 198 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 A0A1W2PRV1 198 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF729A6NN14 1252 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 TRDCB7Z8K6 153 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 ENSAO43768 121 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 TOX4O94842 621 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 LIPFP07098 398 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 HLA-DMAP28067 261 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 FAUP35544 74 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 TAS2R46P59540 309 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 DHRS7BQ6IAN0 325 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 C11orf44Q8N8P7 122 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 OR13A1Q8NGR1 328 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 OR5H2Q8NGV7 314 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 IL1F10Q8WWZ1 152 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 BORCS5Q969J3 196 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 ARL11Q969Q4 196 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 DPAGT1Q9H3H5 408 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 RPUSD1Q9UJJ7 312 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 SIGLEC9Q9Y336 463 aa10.11□□□□□ -0.79
CLSTN3-208ENST00000538933 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 CENPXA8MT69 81 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF736B4DX44 427 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 FABP7O15540 132 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 HSPA12AO43301 675 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 ORC5O43913 435 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 IFNA6P05013 189 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 IL7P13232 177 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 BAK1Q16611 211 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 LTC4SQ16873 150 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 ACTBL2Q562R1 376 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 RNASE10Q5GAN6 216 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 TMEM200BQ69YZ2 307 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 OR52W1Q6IF63 320 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 GAPTQ8N292 157 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 UBALD1Q8TB05 177 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 GALMQ96C23 342 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 GINS4Q9BRT9 223 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 MBNL3Q9NUK0 354 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 TAS2R3Q9NYW6 316 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 CALYQ9NYX4 217 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 VPREB3Q9UKI3 123 aa10.1□□□□□ -0.79
CLSTN3-208ENST00000538933 UPK1BO75841 260 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 HBZP02008 142 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 PMP2P02689 132 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 GSTT2P0CG29 244 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 AKAIN1P0CW23 69 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF728P0DKX0 622 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 CCL3L1P16619 93 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 SSTR5P35346 364 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 TSPAN5P62079 268 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF273Q14593 569 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 CDK10Q15131 360 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF880Q6PDB4 577 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 ZNF554Q86TJ5 538 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 TMEM229BQ8NBD8 167 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 OR4A4PQ8NGN8 299 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 RFESDQ8TAC1 157 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 C8orf46Q8TAG6 207 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 CORO2AQ92828 525 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 LHX4Q969G2 390 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 KIRREL1Q96J84 757 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 MMP28Q9H239 520 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 MCUBQ9NWR8 336 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 EHFQ9NZC4 300 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 ANXA10Q9UJ72 324 aa10.09□□□□□ -0.79
CLSTN3-208ENST00000538933 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms