RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 TNFSF12O43508 249 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 PDE6DO43924 150 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 PDGFBP01127 241 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 SERPINA7P05543 415 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 BCL3P20749 454 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 RPL29P47914 159 aaKnown RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 DSCR4P56555 118 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 SOX8P57073 446 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 YPEL3P61236 119 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CCL7P80098 99 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 PSG4Q00888 419 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 OR4F5Q8NH21 305 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 HLA-CQ95604 372 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CLDN23Q96B33 292 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 OR4F4Q96R69 305 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TBX15Q96SF7 602 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 C1QTNF5Q9BXJ0 243 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 OR2H1Q9GZK4 316 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TMEM9BQ9NQ34 198 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TMEM106BQ9NUM4 274 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 LIN7CQ9NUP9 197 aaKnown RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 GJE1A6NN92 205 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 HS3ST1O14792 307 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 LILRA1O75019 489 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 BRS3P32247 399 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TPPP2P59282 170 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TMEM183BQ1AE95 376 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 RIPPLY2Q5TAB7 128 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 ZNF705AQ6ZN79 300 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 OR10V1Q8NGI7 309 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 OR51H1Q8NH63 302 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 CMTM2Q8TAZ6 248 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 TMEM147Q9BVK8 224 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 WNT5BQ9H1J7 359 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 LPAR2Q9HBW0 351 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 C19orf25Q9UFG5 118 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-230ENST00000495090 IL17BQ9UHF5 180 aa8.23□□□□□ -1.09
SYNE1-230ENST00000495090 IGHV3-15A0A0B4J1V0 119 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 SOX15O60248 233 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 IL6RP08887 468 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-230ENST00000495090 NPSP0C0P6 89 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 EDN3P14138 238 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 GLB1P16278 677 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 COX5AP20674 150 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 TPTE2P1Q5T6R2 138 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 FAM78BQ5VT40 261 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 MKXQ8IYA7 352 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 OR10G9Q8NGN4 311 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 OR10G7Q8NGN6 311 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 OR5P3Q8WZ94 311 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 GMPPAQ96IJ6 420 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-230ENST00000495090 DIRC2Q96SL1 478 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 DEFB126Q9BYW3 111 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
SYNE1-230ENST00000495090 A0A0U1RQK1 487 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 ZNF320A2RRD8 509 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 ZNF705FA8MVS1 300 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-230ENST00000495090 F6UZH7 168 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 IGLV2-14P01704 120 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 UMODP07911 640 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 ZNF705DP0CH99 300 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-230ENST00000495090 ZNF705BP0CI00 300 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-230ENST00000495090 IRF2P14316 349 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 LIFP15018 202 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 GCH1P30793 250 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 PRSS12P56730 875 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 TESK1Q15569 626 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 PRSS8Q16651 343 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 VWC2Q2TAL6 325 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 NRN1LQ496H8 165 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 RAET1LQ5VY80 246 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 TMEM256Q8N2U0 113 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 THOC3Q96J01 351 aaKnown RBP8.21□□□□□ -1.09
SYNE1-230ENST00000495090 FOXB1Q99853 325 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 TXNDC17Q9BRA2 123 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 OR51B6Q9H340 312 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 ELOVL5Q9NYP7 299 aa8.21□□□□□ -1.09
SYNE1-230ENST00000495090 IGHV1OR15-9A0A0B4J2B8 117 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 TRAPPC2LH3BP13 241 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 ZIC3O60481 467 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 RAC3P60763 192 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 HYAL1Q12794 435 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 IZUMO4Q1ZYL8 232 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 CLEC12BQ2HXU8 276 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 CEACAM21Q3KPI0 293 aa8.21□□□□□ -1.1
SYNE1-230ENST00000495090 ZNF585BQ52M93 769 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms