RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TEPPQ6URK8 271 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 SSX7Q7RTT5 188 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 P4HA3Q7Z4N8 544 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 HAPLN4Q86UW8 402 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 GBGT1Q8N5D6 347 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 TMEM217Q8N7C4 229 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 OR2AE1Q8NHA4 323 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 CPT1CQ8TCG5 803 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 SCGB1C1Q8TD33 95 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 GPR146Q96CH1 333 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 OR5B12Q96R08 314 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 RASL10BQ96S79 203 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 IMMP2LQ96T52 175 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 SMIM7Q9BQ49 75 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 WDR61Q9GZS3 305 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 RBKSQ9H477 322 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 SH2D2AQ9NP31 389 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 MANBALQ9NQG1 85 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 FGF21Q9NSA1 209 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 OR6C3Q9NZP0 311 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 C19orf25Q9UFG5 118 aaPredicted RBP3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 PRSS50Q9UI38 385 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 LAMP3Q9UQV4 416 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 CHCHD2Q9Y6H1 151 aaPredicted RBP3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 ATP23Q9Y6H3 246 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 PHF3Q92576 2039 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 SPTBP11277 2137 aa3.98□□□□□ -1.77
SMARCC1-206ENST00000485737 LOC102723996A0A087X1L8 192 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 IGKV1-6A0A0C4DH72 117 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 A0A0G2JRQ6 117 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CTXND1A0A1B0GTU2 59 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 GJE1A6NN92 205 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CEBPZOSA8MTT3 80 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 M0R143 59 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 MLNRO43193 412 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SYNGR2O43760 224 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 PGLYRP1O75594 196 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 OR7C1O76099 320 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 MBP02144 154 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 LCATP04180 440 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CD55P08174 381 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 COX5BP10606 129 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ESDP10768 282 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 FGF5P12034 268 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 LIFP15018 202 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 GZMHP20718 246 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TDGF1P3P51864 188 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 DSCR4P56555 118 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ERVFC1-1P60608 527 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 UBE2NP61088 152 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 RPL15P61313 204 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 PAX5Q02548 391 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ARL16Q0P5N6 197 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TMEM267Q0VDI3 215 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 GAGE1Q13065 139 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 P2RY6Q15077 328 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ADIRFQ15847 76 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 DEFB133Q30KQ1 61 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SPIN3Q5JUX0 258 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 DCAF10Q5QP82 559 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SLC25A24Q6NUK1 477 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ZNF774Q6NX45 483 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 KCNIP4Q6PIL6 250 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 PCSK4Q6UW60 755 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 LCN15Q6UWW0 184 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 BTNL3Q6UXE8 466 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TMEM14EPQ6UXP3 125 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 COLCA1Q6ZS62 124 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SHISA6Q6ZSJ9 500 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SYT13Q7L8C5 426 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 MOB1BQ7L9L4 216 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TMEM144Q7Z5S9 345 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CALHM1Q8IU99 346 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 ZNF611Q8N823 705 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 MRPL30Q8TCC3 161 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 THAP3Q8WTV1 239 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TAF15Q92804 592 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 NAT6Q93015 286 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 RBM14Q96PK6 669 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 RSG1Q9BU20 258 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 RBM24Q9BX46 236 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 C1QTNF5Q9BXJ0 243 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 SNHG12Q9BXW3 62 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CDIP1Q9H305 208 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 OR51I2Q9H344 312 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 PLK3Q9H4B4 646 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 VSIRQ9H7M9 311 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 UBE2ZQ9H832 354 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 WDR54Q9H977 334 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 CCL28Q9NRJ3 127 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 LIN7CQ9NUP9 197 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 WASF3Q9UPY6 502 aa3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 TNRC6BQ9UPQ9 1833 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-206ENST00000485737 PCNX3Q9H6A9 2034 aa3.96□□□□□ -1.78
SMARCC1-206ENST00000485737 TRAV9-1A0A075B6T8 112 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms