RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 UCHL3P15374 230 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 NPY1RP25929 384 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 MPV17P39210 176 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 SPCS3P61009 180 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 ENDOGQ14249 297 aaKnown RBP3.3□□□□□ -1.88
COPA-203ENST00000481040 HIST2H3PS2Q5TEC6 136 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 CCDC121Q6ZUS5 278 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 ZNF695Q8IW36 515 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 ZNF567Q8N184 647 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 LRRC25Q8N386 305 aaPredicted RBP3.3□□□□□ -1.88
COPA-203ENST00000481040 KRTCAP2Q8N6L1 136 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 FER1L6-AS1Q8NA97 138 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 OR4A5Q8NH83 315 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 Q8WTZ3 238 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 EBNA1BP2Q99848 306 aaKnown RBP3.3□□□□□ -1.88
COPA-203ENST00000481040 MED18Q9BUE0 208 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 TLNRD1Q9H1K6 362 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 OR51I2Q9H344 312 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 TXNIPQ9H3M7 391 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
COPA-203ENST00000481040 KIF15Q9NS87 1388 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 BRWD3Q6RI45 1802 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 IGLV3-16A0A075B6K0 115 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 IGLL5B9A064 214 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 MRASO14807 208 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 BET1O15155 118 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 SERPINA1P01009 418 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 IL4P05112 153 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 MUC1P15941 1255 aaPredicted RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 GDI2P50395 445 aaKnown RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 CTBP2P56545 445 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 HERVK_113P63121 156 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ZNF616Q08AN1 781 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 CASP8Q14790 479 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 MAPK14Q16539 360 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ZCWPW2Q504Y3 356 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 FAM131AQ6UXB0 335 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 DAZ4Q86SG3 579 aaKnown RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 STX12Q86Y82 276 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 TMEM86BQ8N661 226 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 Q8N9L7 120 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 RTN4IP1Q8WWV3 396 aaPredicted RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 RBPMSQ93062 196 aaKnown RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 CMBLQ96DG6 245 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ABHD14BQ96IU4 210 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ANKRD36BP1Q96IX9 119 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 SLC35G5Q96KT7 338 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 TRIB3Q96RU7 358 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 MED28Q9H204 178 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 DAZ1Q9NQZ3 744 aaKnown RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 INIPQ9NRY2 104 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ZNF586Q9NXT0 402 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ZNF230Q9UIE0 474 aaPredicted RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 DNAJC12Q9UKB3 198 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 ARL2BPQ9Y2Y0 163 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 SAMHD1Q9Y3Z3 626 aaKnown RBP3.29□□□□□ -1.88
COPA-203ENST00000481040 NUP205Q92621 2012 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 TICRRQ7Z2Z1 1910 aa3.29□□□□□ -1.88
COPA-203ENST00000481040 RPRD2Q5VT52 1461 aaKnown RBP3.28□□□□□ -1.88
COPA-203ENST00000481040 COL27A1Q8IZC6 1860 aaPredicted RBP3.28□□□□□ -1.88
COPA-203ENST00000481040 PLCH2O75038 1416 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 LEUTXA8MZ59 168 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 C4orf51C9J302 202 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 CHP2O43745 196 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 DEDDO75618 318 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 GABRA3P34903 492 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.88
COPA-203ENST00000481040 LINC00313P59037 77 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 IFITM2Q01629 132 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 FUT5Q11128 374 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 PRDX4Q13162 271 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 BATFQ16520 125 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 ACSBG2Q5FVE4 666 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 FAM78BQ5VT40 261 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 FAM71E1Q6IPT2 247 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 Q6P435 159 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 ZNF550Q7Z398 422 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 UBL4BQ8N7F7 174 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 SLC35B4Q969S0 331 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 DIRAS2Q96HU8 199 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 GLTPQ9NZD2 209 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 ATPIF1Q9UII2 106 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 PCYT1BQ9Y5K3 369 aaPredicted RBP3.28□□□□□ -1.88
COPA-203ENST00000481040 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
COPA-203ENST00000481040 TP53BP1Q12888 1972 aaPredicted RBP3.27□□□□□ -1.89
COPA-203ENST00000481040 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 STK16O75716 305 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 ZNF189O75820 626 aaPredicted RBP3.27□□□□□ -1.89
COPA-203ENST00000481040 GPR75O95800 540 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 PDYNP01213 254 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 CGB3P0DN86 165 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 CGB7P0DN87 165 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 PRPS1L1P21108 318 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 TGFBR2P37173 567 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 OR1E2P47887 323 aa3.27□□□□□ -1.89
COPA-203ENST00000481040 MARCKSL1P49006 195 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms