RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ADAM5Q6NVV9 412 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 MEX3BQ6ZN04 569 aaKnown RBP6.84□□□□□ -1.32
CCDC39-201ENST00000442201 FAM185AQ8N0U4 392 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 FAM58AQ8N1B3 248 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 PLPPR2Q96GM1 343 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF488Q96MN9 340 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 CLUHP3Q96NS8 147 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 CADP27708 2225 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF736B4DX44 427 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 PDCD6O75340 191 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CD3EP07766 207 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 FUT3P21217 361 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 SNU13P55769 128 aaKnown RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 MPV17LQ2QL34 196 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 STEAP1BQ6NZ63 245 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 BAP18Q8IXM2 172 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 TMEM229BQ8NBD8 167 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 EMG1Q92979 244 aaKnown RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 FLVCR2Q9UPI3 526 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 ZG16O60844 167 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CD8AP01732 235 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CD3DP04234 171 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CTXN2P0C2S0 81 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 SLC25A4P12235 298 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 EIF5AP63241 154 aaKnown RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 BEX5Q5H9J7 111 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF808Q8N4W9 903 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CSTL1Q9H114 145 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 ESPL1Q14674 2120 aa6.83□□□□□ -1.32
CCDC39-201ENST00000442201 CLDN14O95500 239 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SOD3P08294 240 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 OR4A8P0C604 315 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SFTA3P0C7M3 94 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 PGA5P0DJD9 388 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 CAV2P51636 162 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 LUMP51884 338 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-201ENST00000442201 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SELENOTP62341 195 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 IL13RA2Q14627 380 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 PDCD1Q15116 288 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 ADIPOQQ15848 244 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 PRAMEF6Q5VXH4 476 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SFRP4Q6FHJ7 346 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-201ENST00000442201 FAAP20Q6NZ36 180 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 PRSS57Q6UWY2 283 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 LINC00596Q86U02 117 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 BPIFB2Q8N4F0 458 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 GVQW1Q8N7I0 195 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 OR4C16Q8NGL9 310 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 FAAP24Q9BTP7 215 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF581Q9P0T4 197 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 TNFSF18Q9UNG2 199 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 POMT1Q9Y6A1 747 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 IGSF10Q6WRI0 2623 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 NKX6-3A6NJ46 265 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SPRY3O43610 288 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 CD74P04233 296 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 GZMBP10144 247 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 OR3A1P47881 315 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 ERVK11-1P61568 191 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 TFF3Q07654 80 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 LEMD1Q68G75 181 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 OR8G2PQ6IF36 304 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SLC36A1Q7Z2H8 476 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 TERB2Q8NHR7 220 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SULT4A1Q9BR01 284 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 BEX1Q9HBH7 125 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 LPAR2Q9HBW0 351 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 IL36RNQ9UBH0 155 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
CCDC39-201ENST00000442201 KANTRA0A1W2PQU2 76 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 IL6RP08887 468 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-201ENST00000442201 TBPP20226 339 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 TNFSF4P23510 183 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 DUSP1P28562 367 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF826PQ6ZT77 177 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 POC1AQ8NBT0 407 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 OR4S1Q8NGB4 309 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 FAM216AQ8WUB2 273 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 ITLN2Q8WWU7 325 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-201ENST00000442201 CYYR1Q96J86 154 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 RNF115Q9Y4L5 304 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 KPTNQ9Y664 436 aa6.82□□□□□ -1.32
CCDC39-201ENST00000442201 SHISA9B4DS77 424 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 ARPC1BO15143 372 aaKnown RBP6.81□□□□□ -1.32
CCDC39-201ENST00000442201 PSMB6P28072 239 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 ERVFC1-1P60608 527 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 MEF2DQ14814 521 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 DAZAP2Q15038 168 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-201ENST00000442201 C2orf68Q2NKX9 166 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 BRICD5Q6PL45 260 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 WDR82Q6UXN9 313 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 BOLLQ8N9W6 283 aaKnown RBP6.81□□□□□ -1.32
CCDC39-201ENST00000442201 OR2AK2Q8NG84 335 aa6.81□□□□□ -1.32
CCDC39-201ENST00000442201 OR2V2Q96R30 315 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms