RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 DIRC2Q96SL1 478 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 SRXN1Q9BYN0 137 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 PPIAL4AQ9Y536 164 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 CLEC18AA5D8T8 446 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 H0Y980 276 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 ETV2O00321 342 aaPredicted RBP14.18□□□□□ -0.14
PKP4-204ENST00000421462 CEACAM16Q2WEN9 425 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 CLEC18CQ8NCF0 446 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 OR10J5Q8NHC4 309 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 TAF15Q92804 592 aaKnown RBP eCLIP14.18□□□□□ -0.14
PKP4-204ENST00000421462 IMMP2LQ96T52 175 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 WDR61Q9GZS3 305 aaKnown RBP14.18□□□□□ -0.14
PKP4-204ENST00000421462 PLSCR2Q9NRY7 297 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 PTRH2Q9Y3E5 179 aaKnown RBP14.18□□□□□ -0.14
PKP4-204ENST00000421462 DLEU1O43261 78 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 RBMXL2O75526 392 aaKnown RBP14.17□□□□□ -0.14
PKP4-204ENST00000421462 RPLP1P05386 114 aaKnown RBP14.17□□□□□ -0.14
PKP4-204ENST00000421462 SELEP16581 610 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 IL3RAP26951 378 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 HNRNPKP61978 463 aaKnown RBP eCLIP14.17□□□□□ -0.144e-7■■■■□ 25
PKP4-204ENST00000421462 LRRC75BQ2VPJ9 315 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 ACTL10Q5JWF8 245 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 YRDCQ86U90 279 aaKnown RBP14.17□□□□□ -0.14
PKP4-204ENST00000421462 A0A096LPE4 126 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 A0A1W2PPZ6 126 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 LILRA1O75019 489 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 SCRG1O75711 98 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 CCL3P10147 92 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 OR5I1Q13606 314 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 OR8B8Q15620 311 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 DERL1Q9BUN8 251 aa14.17□□□□□ -0.14
PKP4-204ENST00000421462 KIAA1324LA8MWY0 1029 aaPredicted RBP14.16□□□□□ -0.14
PKP4-204ENST00000421462 MPLP40238 635 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 ACOT6Q3I5F7 207 aaPredicted RBP14.16□□□□□ -0.14
PKP4-204ENST00000421462 ARSJQ5FYB0 599 aaPredicted RBP14.16□□□□□ -0.14
PKP4-204ENST00000421462 TSTD1Q8NFU3 115 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 OR10G9Q8NGN4 311 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 OR10G7Q8NGN6 311 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 VN1R17PQ8TDU5 208 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 DOCK10Q96BY6 2186 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 hCG_38984A0A1B0GV85 526 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 SYNGR1O43759 233 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 IGKV1-39P01597 117 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 IGKV1D-39P04432 117 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 C1orf194Q5T5A4 169 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
PKP4-204ENST00000421462 MANBALQ9NQG1 85 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 GTF3C1Q12789 2109 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 EDN3P14138 238 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 CCKARP32238 428 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 KCNIP4Q6PIL6 250 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 CLDN23Q96B33 292 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 PYGO2Q9BRQ0 406 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 RNF150Q9ULK6 438 aa14.16□□□□□ -0.14
PKP4-204ENST00000421462 C1QTNF9P0C862 333 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 RAB4AP20338 218 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 HIST1H3AP68431 136 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 COA6Q5JTJ3 125 aaKnown RBP14.15□□□□□ -0.14
PKP4-204ENST00000421462 FFAR4Q5NUL3 377 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 ASCL4Q6XD76 172 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 TGIF2LYQ8IUE0 185 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 FAM103A1Q9BTL3 118 aaKnown RBP14.15□□□□□ -0.14
PKP4-204ENST00000421462 CLN8Q9UBY8 286 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 KNTC1P50748 2209 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 KRASP01116 189 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 IGKV1-5P01602 117 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 SERF2P84101 59 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 RHBDD2Q6NTF9 364 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 AAED1Q7RTV5 226 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 PSMF1Q92530 271 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 MTCH1Q9NZJ7 389 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 DNAJC13O75165 2243 aa14.15□□□□□ -0.14
PKP4-204ENST00000421462 KIR2DS1A0A191URI9 304 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 TRAPPC2LH3BP13 241 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 OR10J1P30954 320 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 KIR2DS4P43632 304 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 THBS3P49746 956 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 TNFSF10P50591 281 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 KIR2DS1Q14954 304 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 TMEM38BQ9NVV0 291 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 CHCHD2Q9Y6H1 151 aaPredicted RBP14.14□□□□□ -0.15
PKP4-204ENST00000421462 COL5A1P20908 1838 aaPredicted RBP14.14□□□□□ -0.15
PKP4-204ENST00000421462 TP53I11O14683 189 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 TCF21O43680 179 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 TFF3Q07654 80 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 PRDX4Q13162 271 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 FOXB1Q99853 325 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 WNT5BQ9H1J7 359 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 OR2W1Q9Y3N9 320 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 ATP23Q9Y6H3 246 aa14.14□□□□□ -0.15
PKP4-204ENST00000421462 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 C11orf94C9JXX5 98 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 NAPSAO96009 420 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 SGMS2Q8NHU3 365 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 OR5P3Q8WZ94 311 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 PINX1Q96BK5 328 aaKnown RBP14.13□□□□□ -0.15
PKP4-204ENST00000421462 OPN3Q9H1Y3 402 aaPredicted RBP14.13□□□□□ -0.15
PKP4-204ENST00000421462 CLEC1BQ9P126 229 aa14.13□□□□□ -0.15
PKP4-204ENST00000421462 CBY1Q9Y3M2 126 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms