RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 MGST3O14880 152 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 CA11O75493 328 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 CSN2P05814 226 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 CDK2P24941 298 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 ERP29P30040 261 aaKnown RBP10.23□□□□□ -0.77
LINC00339-202ENST00000416769 TNFSF8P32971 234 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 S100A5P33763 92 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 OR3A1P47881 315 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 PAX5Q02548 391 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 GRK1Q15835 563 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 CDNFQ49AH0 187 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 PLAC9Q5JTB6 97 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 C9orf152Q5JTZ5 239 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 MINOS1Q5TGZ0 78 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 LINC00299Q6ZSB3 139 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 C6orf201Q7Z4U5 140 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 OR6Q1Q8NGQ2 317 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 ARHGAP5-AS1Q96IT6 56 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 FAAP24Q9BTP7 215 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 CLEC7AQ9BXN2 247 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 NCOR1P1Q9H4R4 102 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 PTTG2Q9NZH5 202 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-202ENST00000416769 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 MINOS1-NBL1R4GNA1 71 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
LINC00339-202ENST00000416769 TRAV18A0A075B6X5 111 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 RBP4P02753 201 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 SNRNP70P08621 437 aaKnown RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 HIST1H1DP16402 221 aaKnown RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 NKAPLQ5M9Q1 402 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 LAX1Q8IWV1 398 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 DIRAS2Q96HU8 199 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 NOL4LQ96MY1 436 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 SULT4A1Q9BR01 284 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 RIMS4Q9H426 269 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 ING3Q9NXR8 418 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 GAR1Q9NY12 217 aaKnown RBP10.22□□□□□ -0.77
LINC00339-202ENST00000416769 EXTL2Q9UBQ6 330 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 LINC00527Q9UJ94 153 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 KCNK7Q9Y2U2 307 aa10.22□□□□□ -0.77
LINC00339-202ENST00000416769 SACSQ9NZJ4 4579 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 hADV38S2A0JD32 116 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 UBE2QL1A1L167 161 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 SERPINE3A8MV23 424 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 MFNGO00587 321 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 GNB3P16520 340 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 HTR1DP28221 377 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 TALDO1P37837 337 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 MNDAP41218 407 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 GAPTQ8N292 157 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 ABHD12Q8N2K0 398 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 NEK7Q8TDX7 302 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 LINC00312Q9Y6C7 94 aa10.21□□□□□ -0.77
LINC00339-202ENST00000416769 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
LINC00339-202ENST00000416769 HSPB6O14558 160 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 HLA-DQB1P01920 261 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 MT-ND4P03905 459 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 TAS2R20P59543 309 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 PITPNAQ00169 270 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-202ENST00000416769 AESQ08117 197 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 KRBOX4Q5JUW0 171 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 TMEM69Q5SWH9 247 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 HACD4Q5VWC8 232 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-202ENST00000416769 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 TRAPPC6BQ86SZ2 158 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 CCDC190Q86UF4 302 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 CORO2AQ92828 525 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 COQ2Q96H96 371 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
LINC00339-202ENST00000416769 SOSTQ9BQB4 213 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 AUNIPQ9H7T9 357 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 DPM3Q9P2X0 92 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 AK3Q9UIJ7 227 aa10.2□□□□□ -0.78
LINC00339-202ENST00000416769 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 FABP12A6NFH5 140 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 OR2F2O95006 317 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 IGLV1-47P01700 117 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 CD3GP09693 182 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 PTBP1P26599 531 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 ETV6P41212 452 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 GLIPR1P48060 266 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 THBS3P49746 956 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms