RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 FADS6Q8N9I5 356 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 OR56B2PQ8NGI1 322 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 CCDC74BQ96LY2 380 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 RAB40CQ96S21 281 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 SEPSECSQ9HD40 501 aaKnown RBP16.12■□□□□ 0.17
HOXC6-202ENST00000394331 DKK1O94907 266 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 FCGR2AP12318 317 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 OPRM1P35372 400 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 GRB2P62993 217 aaKnown RBP16.12■□□□□ 0.17
HOXC6-202ENST00000394331 VN1R17PQ8TDU5 208 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 HSPB9Q9BQS6 159 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 TP53TG3Q9ULZ0 132 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 PIGBOS1A0A0B4J2F0 54 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF814B7Z6K7 855 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 HSBP1L1C9JCN9 74 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 RER1O15258 196 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 SLC25A6P12236 298 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 CTSSP25774 331 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 CDKN1AP38936 164 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 CLEC12BQ2HXU8 276 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 LRRC75BQ2VPJ9 315 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 C1orf174Q8IYL3 243 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 PNRC2Q9NPJ4 139 aaKnown RBP16.11■□□□□ 0.17
HOXC6-202ENST00000394331 A0A0U1RQK1 487 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF320A2RRD8 509 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 PPYP01298 95 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 BMP5P22003 454 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 LINC00310P59036 64 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 CHODLQ9H9P2 273 aa16.11■□□□□ 0.17
HOXC6-202ENST00000394331 IGHV2OR16-5A0A0B4J2B6 119 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 A0A1B0GUS0 222 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 MSMO1Q15800 293 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 FAM78BQ5VT40 261 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 LHX4Q969G2 390 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 LY6G6EA0A0G2JKS1 128 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
HOXC6-202ENST00000394331 MRPL14Q6P1L8 145 aaKnown RBP16.1■□□□□ 0.17
HOXC6-202ENST00000394331 LRP11Q86VZ4 500 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 MRPS16Q9Y3D3 137 aaKnown RBP16.1■□□□□ 0.17
HOXC6-202ENST00000394331 TIMM9Q9Y5J7 89 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 U3KQA8 63 aa16.1■□□□□ 0.17
HOXC6-202ENST00000394331 SDK1Q7Z5N4 2213 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 IGLC2P0DOY2 106 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 IGLC3P0DOY3 106 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 ADMP35318 185 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 LYSMD4Q5XG99 296 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 TBC1D26Q86UD7 250 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF525Q8N782 197 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF703Q9H7S9 590 aaPredicted RBP16.09■□□□□ 0.17
HOXC6-202ENST00000394331 RYDENQ9NUL5 291 aaKnown RBP16.09■□□□□ 0.17
HOXC6-202ENST00000394331 CHCHD2Q9Y6H1 151 aaPredicted RBP16.09■□□□□ 0.17
HOXC6-202ENST00000394331 A0A0U1RQV5 110 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 AQP7O14520 342 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 DHRS3O75911 302 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 WDR5BQ86VZ2 330 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 C20orf196Q8IYI0 205 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 ELOVL5Q9NYP7 299 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 ST3GAL6Q9Y274 331 aa16.09■□□□□ 0.17
HOXC6-202ENST00000394331 TRAV9-1A0A075B6T8 112 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 TMPRSS2O15393 492 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 FBLN7Q53RD9 439 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 TIPARPQ7Z3E1 657 aaKnown RBP16.08■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF295-AS1Q8N0V1 137 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 Q8N976 141 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 SAP25Q8TEE9 199 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 WDR54Q9H977 334 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 TAAR3PQ9P1P4 343 aa16.08■□□□□ 0.17
HOXC6-202ENST00000394331 TRAV30A0A087WSZ9 112 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 FAM166BA8MTA8 275 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 ZNF205O95201 554 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 GNRHRP30968 328 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 HNRNPA3P51991 378 aaKnown RBP16.08■□□□□ 0.16
HOXC6-202ENST00000394331 CLDN17P56750 224 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 SUMO1P63165 101 aaKnown RBP16.08■□□□□ 0.16
HOXC6-202ENST00000394331 NAT6Q93015 286 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 SLC39A9Q9NUM3 307 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 ANOS1P23352 680 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 Q0VG73 95 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 PRAMEF20Q5VT98 475 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 OR5D13Q8NGL4 314 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 LYZL4Q96KX0 146 aa16.08■□□□□ 0.16
HOXC6-202ENST00000394331 RALGAPA1Q6GYQ0 2036 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 HYPMO75409 117 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 WNT2P09544 360 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 SPATA45Q537H7 98 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 CSTL1Q9H114 145 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 LOC102723996A0A087X1L8 192 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 CD33P20138 364 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 LHX2P50458 406 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 OR4C5Q8NGB2 326 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 NEIL1Q96FI4 390 aaPredicted RBP16.07■□□□□ 0.16
HOXC6-202ENST00000394331 PGAM5Q96HS1 289 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 CDC42EP3Q9UKI2 254 aa16.07■□□□□ 0.16
HOXC6-202ENST00000394331 KIAA2026Q5HYC2 2103 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 TMEM238LA0A1B0GVL6 79 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 MSR1P21757 451 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 PCOLCEQ15113 449 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 RNF151Q2KHN1 245 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 CALHM1Q8IU99 346 aa16.06■□□□□ 0.16
HOXC6-202ENST00000394331 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms