RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 H3BML4 177 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 GZMHP20718 246 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 ANOS1P23352 680 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 OR10J1P30954 320 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 ELLP55199 621 aaPredicted RBP9.52□□□□□ -0.89
CUX1-204ENST00000393824 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 ACTL10Q5JWF8 245 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 NCR3LG1Q68D85 454 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 MDS2Q8NDY4 140 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 MOB3AQ96BX8 217 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 SPIN2AQ99865 258 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 SPIN2BQ9BPZ2 258 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 SVILO95425 2214 aa9.52□□□□□ -0.89
CUX1-204ENST00000393824 RP1L1Q8IWN7 2480 aaPredicted RBP9.51□□□□□ -0.89
CUX1-204ENST00000393824 CLEC18AA5D8T8 446 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 RPL29P47914 159 aaKnown RBP9.51□□□□□ -0.89
CUX1-204ENST00000393824 RRADP55042 308 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 FXYD4P59646 89 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 VAMP2P63027 116 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 ID3Q02535 119 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 IL24Q13007 206 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 RNFT1Q5M7Z0 435 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 SLC25A24Q6NUK1 477 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 CLEC18CQ8NCF0 446 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 TP53RKQ96S44 253 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 DIRC2Q96SL1 478 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 ATP5SQ99766 215 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 EMC6Q9BV81 110 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 LPAR2Q9HBW0 351 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 LOC102725191A0A1B0GVB3 256 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 ZFP92A6NM28 416 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 CST7O76096 145 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 P04436 131 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 TYMSP04818 313 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 PMP22Q01453 160 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 FAM57BQ71RH2 274 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 C16orf82Q7Z2V1 217 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 YRDCQ86U90 279 aaKnown RBP9.51□□□□□ -0.89
CUX1-204ENST00000393824 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 OR2V1Q8NHB1 315 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 TMEM56Q96MV1 263 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 IMMP2LQ96T52 175 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 TMEM222Q9H0R3 208 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 ZNF665Q9H7R5 613 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 Q9N2K0 584 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 NAGKQ9UJ70 344 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 TMEM56-RWDD3S4R434 201 aa9.51□□□□□ -0.89
CUX1-204ENST00000393824 C3orf85A0A1B0GTC6 90 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 A0A1W2PN81 502 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 ZNHIT1O43257 154 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 SSSCA1O60232 199 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 TMEM50AO95807 157 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 HPRT1P00492 218 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 BRS3P32247 399 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 CHRNA7P36544 502 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 IDH3GP51553 393 aaPredicted RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 ARG2P78540 354 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 MFAP5Q13361 173 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 ZNF787Q6DD87 383 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 MRGPRGQ86SM5 289 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 C17orf78Q8N4C9 275 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 OR2M7Q8NG81 312 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 TMEM37Q8WXS4 190 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 PGAM5Q96HS1 289 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 OR5B12Q96R08 314 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 FAAP24Q9BTP7 215 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 PARD6GQ9BYG4 376 aaPredicted RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 RPRMQ9NS64 109 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 PRSS50Q9UI38 385 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 FAM166BA8MTA8 275 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 MPPED1O15442 326 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 CEACAM4O75871 244 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 DHRS3O75911 302 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 ZNF205O95201 554 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 FCGR2AP12318 317 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 IRF2P14316 349 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 FKBP2P26885 142 aaKnown RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 OPRM1P35372 400 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 GALR1P47211 349 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 NPBWR2P48146 333 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 TNFSF10P50591 281 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 ZNF41P51814 821 aaPredicted RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 GNB2P62879 340 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 DMRTC1Q5HYR2 192 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 CXorf66Q5JRM2 361 aaPredicted RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 SMIM15Q7Z3B0 74 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 CISD2Q8N5K1 135 aaKnown RBP9.5□□□□□ -0.89
CUX1-204ENST00000393824 TMEM217Q8N7C4 229 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 OXGR1Q96P68 337 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 RNF150Q9ULK6 438 aa9.5□□□□□ -0.89
CUX1-204ENST00000393824 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
CUX1-204ENST00000393824 ZNF814B7Z6K7 855 aa9.49□□□□□ -0.89
CUX1-204ENST00000393824 H7BYZ3 331 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms