RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 IGHV3-21A0A0B4J1V1 117 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 B4DEV8 164 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 VDAC1P21796 283 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 VKORC1L1Q8N0U8 176 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF596Q8TC21 504 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 LRRC3CA6NJW4 275 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR2H2O95918 312 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 MST1P26927 711 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 DHRS13Q6UX07 377 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CARFQ8N187 725 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 MRPL30Q8TCC3 161 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CORO2AQ92828 525 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF837Q96EG3 531 aaPredicted RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 WNT5BQ9H1J7 359 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 PCED1AQ9H1Q7 454 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CHRNB4P30926 498 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 RTP5Q14D33 572 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 FAM27BQ5VT28 67 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR2J1Q9GZK6 312 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR5B21A6NL26 309 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 SP1P08047 785 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ETFRF1Q6IPR1 90 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR5D13Q8NGL4 314 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR1L1Q8NH94 360 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CYB5R3P00387 301 aaPredicted RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 PSG5Q15238 335 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF826PQ6ZT77 177 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 GINS3Q9BRX5 216 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 PAM16Q9Y3D7 125 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 CDS2O95674 445 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 P2RY6Q15077 328 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 HES3Q5TGS1 186 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 TMEM252Q8N6L7 170 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 VN1R17PQ8TDU5 208 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 EDARADDQ8WWZ3 215 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 FKBP11Q9NYL4 201 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 IL17BQ9UHF5 180 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 KIR2DS2P43631 304 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 RHOBP62745 196 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 PNRC1Q12796 327 aaPredicted RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 OR5I1Q13606 314 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 PPP1R14DQ9NXH3 145 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 NUP210Q8TEM1 1887 aaPredicted RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 VAMP3Q15836 100 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 MOB3BQ86TA1 216 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 LINC00596Q86U02 117 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 TMEM230Q96A57 120 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 NOL4LQ96MY1 436 aaPredicted RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 CISD1Q9NZ45 108 aaKnown RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1W2PRD5 423 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1W2PRF3 423 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1W2PRM7 423 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 HRASP01112 189 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 Q6ZN92 141 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 MRGPRGQ86SM5 289 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 FAM216AQ8WUB2 273 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 LEAP2Q969E1 77 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 SH2D2AQ9NP31 389 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 FREM3P0C091 2139 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 LINC00587B1AMM8 73 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 RANP62826 216 aaKnown RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 SNRNP200O75643 2136 aaKnown RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 M0R2Z0 102 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ORM2P19652 201 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 CAMPP49913 170 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 TRA2AQ13595 282 aaKnown RBP eCLIP5.63□□□□□ -1.518e-12■■■■■ 51.5
SMC1A-202ENST00000375340 SLC35E3Q7Z769 313 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF645Q8N7E2 425 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ZPBPQ9BS86 351 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 OR51M1Q9H341 326 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 MPC1Q9Y5U8 109 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 DNAJC13O75165 2243 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 IGKV1D-8A0A087WSZ0 117 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 H0YIZ8 118 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 RPLP1P05386 114 aaKnown RBP5.63□□□□□ -1.51
SMC1A-202ENST00000375340 WNT5AP41221 380 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 FGF12P61328 243 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 OR1P1Q8NH06 330 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 C18orf12Q96KH6 178 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 SPSB2Q99619 263 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 ANGPTL4Q9BY76 406 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 WDR54Q9H977 334 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 TUBD1Q9UJT1 453 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 RFNGQ9Y644 331 aa5.63□□□□□ -1.51
SMC1A-202ENST00000375340 K7EQM0 130 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PAQR4Q8N4S7 273 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF891A8MT65 544 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TRAT1Q6PIZ9 186 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 NUDT16L1Q9BRJ7 211 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 IGKV3D-11A0A0A0MRZ8 115 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1B0GTQ1 180 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PDE6DO43924 150 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 HBZP02008 142 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 RFPL3SP0C7P2 107 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 FHL1Q13642 323 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 KHDC3LQ587J8 217 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 H1FOOQ8IZA3 346 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 OR10G8Q8NGN5 311 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ZDHHC16Q969W1 377 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms