RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 FAM181AQ8N9Y4 354 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 SLC25A28Q96A46 364 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 HS3ST3B1Q9Y662 390 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 ABCA3Q99758 1704 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 SIPA1L3O60292 1781 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-203ENST00000357654 ARRDC5A6NEK1 342 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 FXYD3Q14802 87 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 C1QL2Q7Z5L3 287 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 SSBP3Q9BWW4 388 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-203ENST00000357654 CHST5Q9GZS9 411 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 PRNDQ9UKY0 176 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 CBY1Q9Y3M2 126 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 SIRT4Q9Y6E7 314 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-203ENST00000357654 IGHV1-69-2A0A0G2JMI3 117 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 ISL1P61371 349 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 GAB4Q2WGN9 574 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 C12orf57Q99622 126 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM160Q9NX00 188 aa5.06□□□□□ -1.6
BRCA1-203ENST00000357654 A0A087WX48 190 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 C21orf140B9A014 251 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 C22orf46C9J442 243 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 KLK2P20151 261 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 LHX2P50458 406 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 C1orf53Q5VUE5 145 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 MVB12AQ96EY5 273 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 SEMA5BQ9P283 1151 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 FAM208AQ9UK61 1670 aaKnown RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 OR2A4O95047 310 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 CCL3P10147 92 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 OR2A7Q96R45 310 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 RBKSQ9H477 322 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 LPAR3Q9UBY5 353 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 AFDNP55196 1824 aaKnown RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 TCF21O43680 179 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 CEACAM5P06731 702 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 FGF5P12034 268 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 ABHD12Q8N2K0 398 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 OR10D4PQ8NGN7 298 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 RNF167Q9H6Y7 350 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 PEX7O00628 323 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 PTBP1P26599 531 aaKnown RBP eCLIP5.05□□□□□ -1.61e-7■■■■■ 45.2
BRCA1-203ENST00000357654 LINC00158P58513 81 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 ACSF3Q4G176 576 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 GATD1Q8NB37 220 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 ADARB2-AS1A8MUL3 147 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 LOXL4Q96JB6 756 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 SLC6A13Q9NSD5 602 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 CDC42EP3Q9UKI2 254 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 COL1A1P02452 1464 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM129A0AVI4 362 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 POLR2GP62487 172 aaKnown RBP eCLIP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 KLF9Q13886 244 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-203ENST00000357654 SAXO2Q658L1 398 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF826PQ6ZT77 177 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 JPT2Q9H910 190 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 NHSL1Q5SYE7 1610 aa5.05□□□□□ -1.6
BRCA1-203ENST00000357654 ANKRD20A5PA0PJZ0 165 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 B4DEV8 164 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TRDCB7Z8K6 153 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 HSPB1P04792 205 aaKnown RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 SP9P0CG40 484 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ERGP11308 486 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 FABP2P12104 132 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PIGYQ3MUY2 71 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PRSS41Q7RTY9 318 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 MRGPRFQ96AM1 343 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 UCN2Q96RP3 112 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ACER3Q9NUN7 267 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 LAMTOR3Q9UHA4 124 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ALS2Q96Q42 1657 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 BCL9LQ86UU0 1499 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 CHD2O14647 1828 aaKnown RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 DUXBA0A1W2PPF3 345 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 H3BRM9 83 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 EPPINO95925 133 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PRB1P04280 392 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 VAX1Q5SQQ9 334 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 CLEC18BQ6UXF7 455 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 MRPL30Q8TCC3 161 aaKnown RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 OPN4Q9UHM6 478 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 OGG1O15527 345 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PTHLHP12272 177 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 HBBP68871 147 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PSG9Q00887 426 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 NKG7Q16617 165 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 SLC35E3Q7Z769 313 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 OR10G8Q8NGN5 311 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PPP1R1CQ8WVI7 109 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 C18orf15Q96N68 181 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 COL25A1Q9BXS0 654 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM74BQ9NUR3 256 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 DCCP43146 1447 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TRBV20OR9-2A0A075B6H5 130 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM272A0A1B0GTI8 110 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms