RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ASPMQ8IZT6 3477 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 C9orf172C9J069 976 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 DEGS1O15121 323 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 MPZL1O95297 269 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 THBS3P49746 956 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 LHX2P50458 406 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 IGLV3-21P80748 117 aaPredicted RBP6.98□□□□□ -1.29
ATG4A-201ENST00000343524 RNPS1Q15287 305 aaKnown RBP6.98□□□□□ -1.29
ATG4A-201ENST00000343524 OTPQ5XKR4 325 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 STUMQ69YW2 141 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 LHFPL4Q7Z7J7 247 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 GATSQ8NAP1 163 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 OR8B12Q8NGG6 310 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 OR5D13Q8NGL4 314 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 TMEM234Q8WY98 164 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 SIGLEC12Q96PQ1 595 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 POLR1DQ9Y2S0 133 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 TRPM6Q9BX84 2022 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 FRYQ5TBA9 3013 aa6.98□□□□□ -1.29
ATG4A-201ENST00000343524 CEP295Q9C0D2 2601 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 A0A1W2PNV4 684 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 A0A1W2PQD3 144 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 A0A1W2PRU2 124 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 LRP5LA4QPB2 252 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 IFNL4K9M1U5 179 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 CHST1O43916 411 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 NUPR1O60356 82 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 S1PR2O95136 353 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 UTS2O95399 124 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 GPX1P07203 203 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 JMJD7P0C870 316 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 HOXB2P14652 356 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FAHP16930 419 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 KITLGP21583 273 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 CCR2P41597 374 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 OR1D4P47884 311 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 RHOBP62745 196 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FUT7Q11130 342 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 CLEC12BQ2HXU8 276 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FFAR4Q5NUL3 377 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 ZNF468Q5VIY5 522 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FIGLAQ6QHK4 219 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 C1orf210Q8IVY1 113 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 ODF3L1Q8IXM7 274 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 MUC15Q8N387 334 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 ZNF525Q8N782 197 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 OR52L2PQ8NGH6 319 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 C16orf52Q8NHV5 167 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 ZNF596Q8TC21 504 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 BORCS7Q96B45 105 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 RSG1Q9BU20 258 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 VN1R3Q9BXE9 311 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 WDR61Q9GZS3 305 aaKnown RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 A0A1B0GV72 72 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 LOC102725191A0A1B0GVB3 256 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 GRIFINA4D1Z8 144 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 H0Y980 276 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 H0YGG7 62 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 SLC33A1O00400 549 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 CDIPTO14735 213 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 PPYP01298 95 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 NTSR1P30989 418 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 P2RY2P41231 377 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 VIPR2P41587 438 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 AMTP48728 403 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 ARF3P61204 181 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 NNATQ16517 81 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 CXorf66Q5JRM2 361 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 PLPP4Q5VZY2 271 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 OR4A47Q6IF82 309 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 FAM71F2Q6NXP2 309 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 C16orf54Q6UWD8 224 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 DGAT2L6Q6ZPD8 337 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 TBC1D26Q86UD7 250 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 Q8N976 141 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 OR4P4Q8NGL7 312 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 SGMS2Q8NHU3 365 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 C11orf40Q8WZ69 217 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 SFRP2Q96HF1 295 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 SLC17A4Q9Y2C5 497 aa6.97□□□□□ -1.29
ATG4A-201ENST00000343524 TBL2Q9Y4P3 447 aaKnown RBP6.97□□□□□ -1.29
ATG4A-201ENST00000343524 TMED7-TICAM2A0A0A6YYA0 188 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 DPRXA6NFQ7 191 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 SHISA7A6NL88 538 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-201ENST00000343524 CORTO00230 105 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 CELA2BP08218 269 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-201ENST00000343524 FCGR2AP12318 317 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 GLB1P16278 677 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 CAPZBP47756 277 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 CCR5P51681 352 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 METAP1P53582 386 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 PRRX1P54821 245 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 ZNF121P58317 390 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-201ENST00000343524 HIST3H3Q16695 136 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 HLA-DRB5Q30154 266 aa6.96□□□□□ -1.3
ATG4A-201ENST00000343524 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms