RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 F5H697 171 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 HRKO00198 91 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 SOCS1O15524 211 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 IGKV3-11P04433 115 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 PRSS3P2Q8NHM4 247 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 PARP12Q9H0J9 701 aaKnown RBP6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 DOCK4Q8N1I0 1966 aa6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 POLR2AP24928 1970 aaKnown RBP6.69□□□□□ -1.34
ATP2B4-201ENST00000341360 LOC102723971A0A1B0GUV8 181 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ONECUT2O95948 504 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 LIPFP07098 398 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 AREGP15514 252 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ORM2P19652 201 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 TMEM33P57088 247 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 INSL4Q14641 139 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 C3AR1Q16581 482 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 NHLRC3Q5JS37 347 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OTPQ5XKR4 325 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 PPP1R32Q7Z5V6 425 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 SLC35E3Q7Z769 313 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 FAM216AQ8WUB2 273 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OR2V2Q96R30 315 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ASCL3Q9NQ33 180 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 NAT8BQ9UHF3 227 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 IGLV1-36A0A0B4J1U3 117 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 PRR19A6NJB7 356 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 HYPMO75409 117 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 TOX4O94842 621 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 LRRC75BQ2VPJ9 315 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 BSXQ3C1V8 233 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 FAM106AQ4KMX7 169 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 C12orf57Q99622 126 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 CCL28Q9NRJ3 127 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 IDI2-AS1Q9NZ38 188 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OPN4Q9UHM6 478 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 CDC42EP3Q9UKI2 254 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 HIGD1AQ9Y241 93 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 BMPR1BO00238 502 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 SMPD2O60906 423 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 CCKARP32238 428 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 B2MP61769 119 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 COL10A1Q03692 680 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ZXDCQ2QGD7 858 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 EBLN2Q6P2I7 272 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OR1B1Q8NGR6 318 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 MRPL30Q8TCC3 161 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ZMAT5Q9UDW3 170 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 CHST1O43916 411 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 S1PR2O95136 353 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 P01737 135 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 HPXP02790 462 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 FCGR3AP08637 254 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 POLR2GP62487 172 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 INPP5JQ15735 1006 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 SPNS3Q6ZMD2 512 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 PQLC2Q6ZP29 291 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 C5orf17Q8NAS9 161 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OR10G8Q8NGN5 311 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 OR4X1Q8NH49 305 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 JMJD8Q96S16 334 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 GPA33Q99795 319 aa6.68□□□□□ -1.34
ATP2B4-201ENST00000341360 ODAMA1E959 279 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 RBFOX3A6NFN3 312 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 PITX3O75364 302 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 CLDN14O95500 239 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 RECKO95980 971 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 IGKV1D-16P01601 117 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 FCER1GP30273 86 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 GFRA1P56159 465 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 HIST1H3AP68431 136 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 FAM78BQ5VT40 261 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 RELL2Q8NC24 303 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 SNRNP40Q96DI7 357 aaKnown RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 LURAP1Q96LR2 239 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ELOVL1Q9BW60 279 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 DTX4Q9Y2E6 619 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 OR51B2Q9Y5P1 312 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ASCC3Q8N3C0 2202 aaKnown RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 OTOFQ9HC10 1997 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 FNDC1Q4ZHG4 1894 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 FAM157AC9JC47 383 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ISLRO14498 428 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 TM4SF5O14894 197 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 ADRA2AP08913 450 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 NMBP08949 121 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 TSPOP30536 169 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 UCP3P55916 312 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 TUSC1Q2TAM9 212 aa6.67□□□□□ -1.34
ATP2B4-201ENST00000341360 OR4A5Q8NH83 315 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms