RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CR1LQ2VPA4 569 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 ZNF818PQ6ZRF7 136 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 SPICQ8N5J4 248 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 MITD1Q8WV92 249 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 ZNF436Q9C0F3 470 aaPredicted RBP14.36□□□□□ -0.11
CLDN4-201ENST00000340958 PLSCR3Q9NRY6 295 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 SPG11Q96JI7 2443 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 KIAA2026Q5HYC2 2103 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 KBTBD11-OT1A0A1B0GTJ5 212 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 NDUFS7O75251 213 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 FSTL3O95633 263 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 GPR6P46095 362 aaPredicted RBP14.36□□□□□ -0.11
CLDN4-201ENST00000340958 MEF2CQ06413 473 aaPredicted RBP14.36□□□□□ -0.11
CLDN4-201ENST00000340958 OR8B3Q8NGG8 313 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 OR8B2Q96RD0 313 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 GAL3ST2Q9H3Q3 398 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 NAA60Q9H7X0 242 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 LPAR3Q9UBY5 353 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 CLN8Q9UBY8 286 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 MIOXQ9UGB7 285 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 UBE2J1Q9Y385 318 aaPredicted RBP14.36□□□□□ -0.11
CLDN4-201ENST00000340958 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
CLDN4-201ENST00000340958 ZNF729A6NN14 1252 aaPredicted RBP14.35□□□□□ -0.11
CLDN4-201ENST00000340958 FAM25EA8MYX2 175 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 TNFSF12O43508 249 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 RGS11O94810 467 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 Q5BKY6 102 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 NARFLQ9H6Q4 476 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 JPT1Q9UK76 154 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 RNF150Q9ULK6 438 aa14.35□□□□□ -0.11
CLDN4-201ENST00000340958 MPPED1O15442 326 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 PHF1O43189 567 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 NFYBP25208 207 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 SUPT4H1P63272 117 aaKnown RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 TBC1D26Q86UD7 250 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 EDARADDQ8WWZ3 215 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 PDCD10Q9BUL8 212 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 PRR13Q9NZ81 148 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 SIX6O95475 246 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 C17orf58Q2M2W7 97 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 SP6Q3SY56 376 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 THOC7Q6I9Y2 204 aaKnown RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 FAM53AQ6NSI3 398 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 CORO2AQ92828 525 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 NEIL1Q96FI4 390 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 ZNF714Q96N38 554 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 PARP12Q9H0J9 701 aaKnown RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 OR2D2Q9H210 308 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 METTL8Q9H825 291 aaKnown RBP14.34□□□□□ -0.11
CLDN4-201ENST00000340958 TAS2R3Q9NYW6 316 aa14.34□□□□□ -0.11
CLDN4-201ENST00000340958 OVOL3O00110 214 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 OR5AC1P0C628 307 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF273Q14593 569 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 AKR1E2Q96JD6 320 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 IDI2-AS1Q9NZ38 188 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 PSG11Q9UQ72 335 aa14.33□□□□□ -0.12
CLDN4-201ENST00000340958 C3orf85A0A1B0GTC6 90 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 C13orf42A0A1B0GVH6 325 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 C5orf51A6NDU8 294 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 F2RL2O00254 374 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 ANKRD55Q3KP44 614 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 MORN2Q502X0 79 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 PRAMEF5Q5TYX0 476 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 BVESQ8NE79 360 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 NRGNQ92686 78 aa14.32□□□□□ -0.12
CLDN4-201ENST00000340958 SMLR1H3BR10 107 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 CCSO14618 274 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 ST8SIA5O15466 376 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 YPEL1O60688 119 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF16P17020 682 aaPredicted RBP14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GZMKP49863 264 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 RND3P61587 244 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 C2orf68Q2NKX9 166 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 TCF23Q7RTU1 214 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 YPEL2Q96QA6 119 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GPHA2Q96T91 129 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 SUCNR1Q9BXA5 334 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GON7Q9BXV9 100 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 TRBV23-1A0A0A0MS06 115 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 A0A0B4J2A0 478 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 A0A1W2PPH5 198 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GPR37O15354 613 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 PGLYRP1O75594 196 aaPredicted RBP14.31□□□□□ -0.12
CLDN4-201ENST00000340958 C1QBP02746 253 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GIPP09681 153 aaPredicted RBP14.31□□□□□ -0.12
CLDN4-201ENST00000340958 CGB3P0DN86 165 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 CGB7P0DN87 165 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 CCL3L1P16619 93 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GNB2P62879 340 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 LDLRAD3Q86YD5 345 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF525Q8N782 197 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 OR51H1Q8NH63 302 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GRPEL2Q8TAA5 225 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms