RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 IGSF23A1L1A6 192 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 SH2D1BO14796 132 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 HSPB1P04792 205 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 RAB5CP51148 216 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 HBG1P69891 147 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 HBG2P69892 147 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 TMEM187Q14656 261 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 OR1L1Q8NH94 360 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 M1APQ8TC57 530 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 OIT3Q8WWZ8 545 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 NABP1Q96AH0 204 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 C1orf147Q96MC9 270 aaPredicted RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 RTL8AQ9BWD3 113 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ARV1Q9H2C2 271 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ZNF71Q9NQZ8 489 aaPredicted RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 CYTL1Q9NRR1 136 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 COA4Q9NYJ1 87 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 IGLV3-12A0A075B6K2 115 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 PPP1R2P9O14990 202 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 SLC31A2O15432 143 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 VDAC1P21796 283 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 SULT1A2P50226 295 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 PPP1CBP62140 327 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 GALMQ96C23 342 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 TOLLIPQ9H0E2 274 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 PQLC2LA1A4F0 135 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 IGHEP01854 428 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 SSTR5P35346 364 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 PMELP40967 661 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 RND3P61587 244 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 AQP10Q96PS8 301 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 ZNF107Q9UII5 783 aaPredicted RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 ADAMTS9Q9P2N4 1935 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 ZNF705FA8MVS1 300 aaPredicted RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 M0R1X1 148 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 SYNGR2O43760 224 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 ENSAO43768 121 aaKnown RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 TRGC2P03986 189 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 ZNF705DP0CH99 300 aaPredicted RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 ZNF705BP0CI00 300 aaPredicted RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 EIF2S3P41091 472 aaKnown RBP7.04□□□□□ -1.28
HPS4-201ENST00000336873 SLC35B1P78383 322 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 DHODHQ02127 395 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 RAB39BQ96DA2 213 aa7.04□□□□□ -1.28
HPS4-201ENST00000336873 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 CSRP1P21291 193 aaKnown RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 FGF7P21781 194 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 SPCS3P61009 180 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 TRA2AQ13595 282 aaKnown RBP eCLIP7.03□□□□□ -1.28
HPS4-201ENST00000336873 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 ZNF383Q8NA42 475 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 SCCPDHQ8NBX0 429 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 OR10P1Q8NGE3 313 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 OR4A16Q8NH70 328 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 GPR146Q96CH1 333 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 WDR54Q9H977 334 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 CACFD1Q9UGQ2 172 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 KLF13Q9Y2Y9 288 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 hCG_38984A0A1B0GV85 526 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ZNF729A6NN14 1252 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 TRDCB7Z8K6 153 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 OR2H2O95918 312 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 MMP7P09237 267 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 RAB5AP20339 215 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ARR3P36575 388 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 CD200P41217 278 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ECI1P42126 302 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 P2RY1P47900 373 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 REG1BP48304 166 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 NUBP1P53384 320 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 SELENOVP59797 346 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 HMGN3Q15651 99 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 FADS6Q8N9I5 356 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 TMEM178AQ8NBL3 297 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 RND1Q92730 232 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ZDHHC16Q969W1 377 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 OPN3Q9H1Y3 402 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 DLL3Q9NYJ7 618 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ADGRG4Q8IZF6 3080 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 MAP1LC3B2A6NCE7 125 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 ZNF503-AS2A6NEH8 195 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 RPL36A-HNRNPH2H7BZ11 118 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 PGLYRP1O75594 196 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 F2RP25116 425 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 GPX4P36969 197 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 ERVK-16P61578 105 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 RTP5Q14D33 572 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 C1orf87Q8N0U7 546 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 SAT2Q96F10 170 aaPredicted RBP7.03□□□□□ -1.28
HPS4-201ENST00000336873 MAP1LC3BQ9GZQ8 125 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 TMEM222Q9H0R3 208 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 VSIRQ9H7M9 311 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 PLEKHA3Q9HB20 300 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 TMEM100Q9NV29 134 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms