RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RBM11P57052 281 aaKnown RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 GPA33Q99795 319 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 HERPUD1Q15011 391 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 ANKRD33Q7Z3H0 272 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 HPRT1P00492 218 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 CEACAM3P40198 252 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 KIR3DL2P43630 455 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 CTAG1AP78358 180 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 DMRTA1Q5VZB9 504 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 LSM10Q969L4 123 aaKnown RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 ZNF665Q9H7R5 613 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 LMX1BO60663 402 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 ZNF124Q15973 351 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR8B3Q8NGG8 313 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 RARRES2Q99969 163 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 C5orf66Q9H5L9 145 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 AMER3Q8N944 861 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 SCN7AQ01118 1682 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 C1QL1O75973 258 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 TRA2AQ13595 282 aaKnown RBP eCLIP7.17□□□□□ -1.263e-7■■■□□ 14.8
APOB-201ENST00000233242 NIT1Q86X76 327 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 HYPMO75409 117 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 MPZL1O95297 269 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 CBLN3Q6UW01 205 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 DNAJC4Q9NNZ3 241 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 RPS4XP62701 263 aaKnown RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 SLC23A3Q6PIS1 610 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 LOC390937A0A1W2PQ73 354 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 CD40P25942 277 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 FLYWCH2Q96CP2 140 aaKnown RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 OPN3Q9H1Y3 402 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 SF3B6Q9Y3B4 125 aaKnown RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 CYR61O00622 381 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 KIR2DL1P43626 348 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 KIR2DL2P43627 348 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 SPSB4Q96A44 273 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 SMIM8Q96KF7 97 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 ALKBH7Q9BT30 221 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 GOSR1O95249 250 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 EML2O95834 649 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 DNLZQ5SXM8 178 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 AUP1Q9Y679 476 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 TUBGCP6Q96RT7 1819 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 IGHV3-64DA0A0J9YX35 117 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 UBE2CO00762 179 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 CXCL10P02778 98 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 PSG2P11465 335 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 COMPP49747 757 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 RUNX1Q01196 453 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 OR8I2Q8N0Y5 310 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 CACNA1EQ15878 2313 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 DPRXA6NFQ7 191 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 SYNGR1O43759 233 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 KLF3P57682 345 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 PSG6Q00889 435 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 PTPRFP10586 1907 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 ZXDAP98168 799 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 LURAP1LQ8IV03 231 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 GABRG2P18507 467 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 PARLQ9H300 379 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 DNASE2O00115 360 aaPredicted RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 FAM219BQ5XKK7 198 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 GPBAR1Q8TDU6 330 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 MARS2Q96GW9 593 aaKnown RBP7.17□□□□□ -1.26
APOB-201ENST00000233242 HIGD1AQ9Y241 93 aa7.17□□□□□ -1.26
APOB-201ENST00000233242 SLX4Q8IY92 1834 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
APOB-201ENST00000233242 ZP4Q12836 540 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 HIST1H4GQ99525 98 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 MOSPD3O75425 235 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 SPINK9Q5DT21 86 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 PXMP4Q9Y6I8 212 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 ANKRD36A6QL64 1941 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 ASAH2BP0C7U1 165 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 PDCD1Q15116 288 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 CHRNA10Q9GZZ6 450 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 UCP3P55916 312 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 LINC00869P0C866 280 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 ACER2Q5QJU3 275 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 LRRC61Q9BV99 259 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 HYAL3O43820 417 aaPredicted RBP7.16□□□□□ -1.26
APOB-201ENST00000233242 ZFP36L2P47974 494 aaKnown RBP7.16□□□□□ -1.26
APOB-201ENST00000233242 KIAA2026Q5HYC2 2103 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 OR10D3Q8NH80 312 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 SIT1Q9Y3P8 196 aa7.16□□□□□ -1.26
APOB-201ENST00000233242 TRAV38-1A0A0B4J264 116 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms