RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PARLQ9H300 379 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 MANBALQ9NQG1 85 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 PCNX3Q9H6A9 2034 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 C20orf202A1L168 122 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 PDCD6O75340 191 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 ANOS1P23352 680 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 PLA2G5P39877 138 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 RAB7AP51149 207 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 MALLQ13021 153 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 GJC3Q8NFK1 279 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 WFIKKN1Q96NZ8 548 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 MSL2Q9HCI7 577 aa9.29□□□□□ -0.92
UPF3A-212ENST00000619079 ARHGEF17Q96PE2 2063 aaPredicted RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 TLX3O43711 291 aaPredicted RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 YPEL1O60688 119 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 SELEP16581 610 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 S100GP29377 79 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 RPL15P61313 204 aaKnown RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 PPP1CBP62140 327 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 RNPS1Q15287 305 aaKnown RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 ASCL4Q6XD76 172 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 DEFB124Q8NES8 71 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 WDYHV1Q96HA8 205 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 SLC35E1Q96K37 410 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 YPEL2Q96QA6 119 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 SLC39A9Q9NUM3 307 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 ZNF292O60281 2723 aa9.28□□□□□ -0.92
UPF3A-212ENST00000619079 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
UPF3A-212ENST00000619079 E9PLN8 166 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 H0Y980 276 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 GYPAP02724 150 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 CHRNB4P30926 498 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 MFAP5Q13361 173 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 BATFQ16520 125 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 LRRC75BQ2VPJ9 315 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 Q6ZS49 121 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 LHFPL2Q6ZUX7 228 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 OSR2Q8N2R0 312 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 ZNF441Q8N8Z8 693 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 OR51B6Q9H340 312 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 VSIRQ9H7M9 311 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 IL36GQ9NZH8 169 aa9.27□□□□□ -0.92
UPF3A-212ENST00000619079 ASCC3Q8N3C0 2202 aaKnown RBP9.27□□□□□ -0.93
UPF3A-212ENST00000619079 F5H5K5 113 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
UPF3A-212ENST00000619079 ANGPTL7O43827 346 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 OR2J2O76002 312 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 IL3RAP26951 378 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 WNT5AP41221 380 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 DUSP3P51452 185 aaPredicted RBP9.27□□□□□ -0.93
UPF3A-212ENST00000619079 EFNA3P52797 238 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 SSPNQ14714 243 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 RTP5Q14D33 572 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 TPTE2P1Q5T6R2 138 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 CST9LP1Q5W188 147 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 ZNF525Q8N782 197 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 OR1N1Q8NGS0 311 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 TECTBQ96PL2 329 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 TAAR3PQ9P1P4 343 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 LRP4O75096 1905 aa9.27□□□□□ -0.93
UPF3A-212ENST00000619079 H3BML4 177 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SYNGR4O95473 234 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 ESDP10768 282 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 GLB1P16278 677 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 MSR1P21757 451 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 KLF3P57682 345 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SELENOTP62341 195 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 RBX1P62877 108 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 TMEM267Q0VDI3 215 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 MYBPHQ13203 477 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SRSF7Q16629 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 CLEC12BQ2HXU8 276 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 CARD17Q5XLA6 110 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 GUSBP11Q6P575 273 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 TMEM256Q8N2U0 113 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 OR4B1Q8NGF8 309 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 ORAOV1Q8WV07 137 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 DYRK2Q92630 601 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SPTSSAQ969W0 71 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 RASL10BQ96S79 203 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SLC7A10Q9NS82 523 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 COL5A1P20908 1838 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 A0A0U1RQK1 487 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 ZNF320A2RRD8 509 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 C5orf63A6NC05 138 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 SPRY1O43609 319 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 LILRA1O75019 489 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 OTX1P32242 354 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 CDKN1BP46527 198 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 FOXL1Q12952 345 aa9.26□□□□□ -0.93
UPF3A-212ENST00000619079 TRA2AQ13595 282 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF3A-212ENST00000619079 TRIP6Q15654 476 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms