RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 HMGN3Q15651 99 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 LGI3Q8N145 548 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ARV1Q9H2C2 271 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF665Q9H7R5 613 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZDHHC11Q9H8X9 412 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GLRX2Q9NS18 164 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HERV-K104P61576 105 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 TMEM187Q14656 261 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 PIP4P1Q86T03 277 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RSG1Q9BU20 258 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 STARD10Q9Y365 291 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZDBF2Q9HCK1 2354 aa9.28□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 E5RGE8 158 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HSD17B6O14756 317 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR7C1O76099 320 aaPredicted RBP9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NAPSAO96009 420 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 IAPPP10997 89 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 FGF12P61328 243 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 BEND4Q6ZU67 534 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 OR51H1Q8NH63 302 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ABHD14BQ96IU4 210 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 LIME1Q9H400 295 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NAA60Q9H7X0 242 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 ZNF286AQ9HBT8 521 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 NSG2Q9Y328 171 aa9.27□□□□□ -0.92
SENP3-EIF4A1-201ENST00000614237 DEFA4P12838 97 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TAS2R60P59551 318 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MALLQ13021 153 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PIGYQ3MUY2 71 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IGFL2Q6UWQ7 119 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MPC1Q9Y5U8 109 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 DUXBA0A1W2PPF3 345 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 WNT5AP41221 380 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 DYNLT3P51808 116 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PKIAP61925 76 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 EWSR1Q01844 656 aaKnown RBP eCLIP9.27□□□□□ -0.938e-11■■■■□ 21.5
SENP3-EIF4A1-201ENST00000614237 P2RY6Q15077 328 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZNF695Q8IW36 515 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PKIBQ9C010 78 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ST3GAL6Q9Y274 331 aa9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 RBM7Q9Y580 266 aaKnown RBP9.27□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 DOCK10Q96BY6 2186 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CUL9Q8IWT3 2517 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TRAV39A0A0B4J263 110 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CD200P41217 278 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL13RA2Q14627 380 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TUSC5Q8IXB3 177 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MKXQ8IYA7 352 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZNF664Q8N3J9 261 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 LYPD6BQ8NI32 183 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 APH1AQ96BI3 265 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TVP23CQ96ET8 276 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 HIST1H2BLQ99880 126 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ELOVL1Q9BW60 279 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PLEKHA2Q9HB19 425 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PIGBOS1A0A0B4J2F0 54 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ARGFXA6NJG6 315 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 EGR1P18146 543 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MAGEA5P43359 124 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SRPXP78539 464 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CLN3Q13286 438 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 C9orf135Q5VTT2 229 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR1K1Q8NGR3 316 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 WDYHV1Q96HA8 205 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 EGLN1Q9GZT9 426 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SIRT7Q9NRC8 400 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IGHG3P01860 377 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CTXN2P0C2S0 81 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PCP4P48539 62 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GUSBP1Q15486 140 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PLCXD3Q63HM9 321 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 Q6ZPA2 131 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CALHM1Q8IU99 346 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 C1orf87Q8N0U7 546 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FBXL14Q8N1E6 418 aa9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 BCL2L2Q92843 193 aaPredicted RBP9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FGF23Q9GZV9 251 aaPredicted RBP9.26□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR5B21A6NL26 309 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 NPIPB11E5RHQ5 1161 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TUSC2O75896 110 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CELA3AP09093 270 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR4A8P0C604 315 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 NKX2-1P43699 371 aaPredicted RBP9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 P2RY1P47900 373 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MEOX1P50221 254 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IL24Q13007 206 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMPRSS7Q7RTY8 843 aa9.25□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ZDHHC23Q8IYP9 409 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms