RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 C11orf1Q9H5F2 150 aa12.13□□□□□ -0.47
VRK3-217ENST00000599538 MSRB2Q9Y3D2 182 aa12.13□□□□□ -0.47
VRK3-217ENST00000599538 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
VRK3-217ENST00000599538 POMT1Q9Y6A1 747 aa12.13□□□□□ -0.47
VRK3-217ENST00000599538 IGLV3-9A0A075B6K5 115 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 FBXO24O75426 580 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
VRK3-217ENST00000599538 CD40P25942 277 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 SSTR5P35346 364 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 ASCL1P50553 236 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 OR13A1Q8NGR1 328 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 SPTA1P02549 2419 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 DSCAMO60469 2012 aa12.12□□□□□ -0.47
VRK3-217ENST00000599538 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 HBZP02008 142 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 VDAC1P21796 283 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 PRDX2P32119 198 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 KRBOX4Q5JUW0 171 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 RFESDQ8TAC1 157 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 MEGF10Q96KG7 1140 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 FAM24AA6NFZ4 105 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
VRK3-217ENST00000599538 TMEM50AO95807 157 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 ZP3P21754 424 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
VRK3-217ENST00000599538 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 Q6ZRM9 215 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 MRGPRGQ86SM5 289 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
VRK3-217ENST00000599538 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 COQ3Q9NZJ6 369 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 ZNF835Q9Y2P0 537 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
VRK3-217ENST00000599538 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 TAAR5O14804 337 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 ZNF737O75373 536 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 ZNF16P17020 682 aaPredicted RBP12.1□□□□□ -0.47
VRK3-217ENST00000599538 EPHA1P21709 976 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 ZNF585BQ52M93 769 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 TGIF2LYQ8IUE0 185 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 GALMQ96C23 342 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 GPR146Q96CH1 333 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 CLEC18AA5D8T8 446 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 SSSCA1O60232 199 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 IL2RGP31785 369 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 PPP1CCP36873 323 aaKnown RBP12.1□□□□□ -0.47
VRK3-217ENST00000599538 P2RY1P47900 373 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 WFDC8Q8IUA0 241 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 ODF3L1Q8IXM7 274 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 CLEC18CQ8NCF0 446 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
VRK3-217ENST00000599538 MS4A7Q9GZW8 240 aaPredicted RBP12.1□□□□□ -0.47
VRK3-217ENST00000599538 ATRXP46100 2492 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 C16orf97H3BN30 126 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 GPR137BO60478 399 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 SERPINE2P07093 398 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 THBDP07204 575 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 SELLP14151 372 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 AKR1C2P52895 323 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 ID3Q02535 119 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 RAXQ9Y2V3 346 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 SESN1Q9Y6P5 492 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
VRK3-217ENST00000599538 A0A1B0GW55 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DPRXA6NFQ7 191 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 ZNF705EA8MWA4 302 aaPredicted RBP12.08□□□□□ -0.47
VRK3-217ENST00000599538 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 CRYZL1O95825 349 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 IGKV1-5P01602 117 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L2P0CJ85 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L3P0CJ86 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L4P0CJ87 422 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L5P0CJ88 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L6P0CJ89 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L7P0CJ90 424 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 LINC00205P59089 165 aa12.08□□□□□ -0.47
VRK3-217ENST00000599538 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.47
VRK3-217ENST00000599538 DUX4L9Q6RFH8 374 aaPredicted RBP12.08□□□□□ -0.47
VRK3-217ENST00000599538 ZNF808Q8N4W9 903 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms