RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SPACA5Q96QH8 159 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF184Q99676 751 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 LXNQ9BS40 222 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM147Q9BVK8 224 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 YIPF3Q9GZM5 350 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 C20orf27Q9GZN8 174 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 OR52D1Q9H346 318 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 GPR84Q9NQS5 396 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF71Q9NQZ8 489 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 FAM49BQ9NUQ9 324 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 RBFOX1Q9NWB1 397 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 FIS1Q9Y3D6 152 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 HEBP2Q9Y5Z4 205 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 CAMTA1Q9Y6Y1 1673 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 ABCC12Q96J65 1359 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 DCCP43146 1447 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 MTCL1Q9Y4B5 1905 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A087WW49 117 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV2-26A0A0B4J1V2 119 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A0G2JN53 185 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 LOC389332A0A1B0GUA5 103 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A1B0GVG6 124 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 KNCNA6PVL3 124 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 INMT-MINDY4F8WBC2 141 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 UPK1AO00322 258 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 MRASO14807 208 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 FFAR1O14842 300 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 SS18L1O75177 396 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 C8GP07360 202 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 OR12D1P0DN82 309 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 NPY1RP25929 384 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 CNTFRP26992 372 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RPL34P49207 117 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 TAF6P49848 677 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 AKR1D1P51857 326 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF140P52738 457 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 TAS2R19P59542 299 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 IFITM3Q01628 133 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RELAQ04206 551 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 PLP2Q04941 152 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 HTR4Q13639 388 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RUNX3Q13761 415 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 KIAA0087Q14695 138 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 KCNJ8Q15842 424 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 SRSF7Q16629 238 aaKnown RBP eCLIP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 C12orf74Q32Q52 190 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 SCGB2B2Q4G0G5 96 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF343Q6P1L6 599 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ARL9Q6T311 187 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 CXCL17Q6UXB2 119 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 Q6ZRU5 148 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ANKRD29Q8N6D5 301 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 DCAF4L2Q8NA75 395 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 TSTD1Q8NFU3 115 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 OR51H1Q8NH63 302 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RXFP4Q8TDU9 374 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 DCUN1D4Q92564 292 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ARL11Q969Q4 196 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 PTX4Q96A99 478 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 NEURL3Q96EH8 262 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ATXN7L3BQ96GX2 97 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 FCRL1Q96LA6 429 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 TSPAN32Q96QS1 320 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 OR5M11Q96RB7 305 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF649Q9BS31 505 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 PARLQ9H300 379 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 MED11Q9P086 117 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RPS6KB2Q9UBS0 482 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 INSIG2Q9Y5U4 225 aa3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-210ENST00000572787 RLFQ13129 1914 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SSH2Q76I76 1423 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A0X1KG70 313 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 CD300LBA8K4G0 201 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 F5H5P2 479 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 TBL1XO60907 577 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 HLA-DRB1P01911 266 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 GYPCP04921 128 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 CSN2P05814 226 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF806P0C7X5 589 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 EVI2AP22794 236 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 G6PCP35575 357 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 RPL35P42766 123 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 POLR2HP52434 150 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SYNJ2BPP57105 145 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 PSG9Q00887 426 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SIX1Q15475 284 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF404Q494X3 552 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 COA6Q5JTJ3 125 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 AWAT2Q6E213 333 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SBSNQ6UWP8 590 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 CLEC20AQ6ZU45 233 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms