RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CGB3P0DN86 165 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 CGB7P0DN87 165 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 IGKV1-13P0DP09 117 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 ANXA7P20073 488 aaKnown RBP8.85□□□□□ -0.99
TDP1-211ENST00000555178 PPP1CCP36873 323 aaKnown RBP8.85□□□□□ -0.99
TDP1-211ENST00000555178 PAX2Q02962 417 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 RBMS2Q15434 407 aaKnown RBP8.85□□□□□ -0.99
TDP1-211ENST00000555178 PLET1Q6UQ28 207 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 Q6ZNX1 250 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 ARRDC1Q8N5I2 433 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 C11orf42Q8N5U0 333 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 DEDD2Q8WXF8 326 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 TOMM40LQ969M1 308 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 SLC2A8Q9NY64 477 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 TRGV10A0A0A0MS01 117 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 NDUFS8O00217 210 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 GNB2P62879 340 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 C6orf183Q5T699 404 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 NLRC3Q7RTR2 1065 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 ZNF565Q8N9K5 539 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 OR6F1Q8NGZ6 308 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 DACT3Q96B18 629 aaPredicted RBP8.85□□□□□ -0.99
TDP1-211ENST00000555178 PRRT1Q99946 306 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 SSBP3Q9BWW4 388 aaPredicted RBP8.85□□□□□ -0.99
TDP1-211ENST00000555178 REG4Q9BYZ8 158 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 OR6C3Q9NZP0 311 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 KBTBD11-OT1A0A1B0GTJ5 212 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 HSPA12AO43301 675 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 PPYP01298 95 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 RLN1P04808 185 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 CR1LQ2VPA4 569 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 TMED4Q7Z7H5 227 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 OR10J5Q8NHC4 309 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 TERB2Q8NHR7 220 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 CAPSLQ8WWF8 208 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 GALMQ96C23 342 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 RBMXL1Q96E39 390 aaKnown RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 GPHA2Q96T91 129 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 FOXC2Q99958 501 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 OR2S2Q9NQN1 319 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 LINC00312Q9Y6C7 94 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 SONP18583 2426 aaKnown RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 A0A1W2PPE3 182 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 hADV38S2A0JD32 116 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 USF1P22415 310 aaPredicted RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 CEACAM6P40199 344 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 DLX6P56179 175 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 LOXL3P58215 753 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 DHRS11Q6UWP2 260 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 H1FOOQ8IZA3 346 aaPredicted RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 ADAD2Q8NCV1 583 aaKnown RBP8.84□□□□□ -0.99
TDP1-211ENST00000555178 ZNF714Q96N38 554 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 MARVELD1Q9BSK0 173 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 ZNF69Q9UC07 566 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 NUBP2Q9Y5Y2 271 aa8.84□□□□□ -0.99
TDP1-211ENST00000555178 FUOMA2VDF0 154 aa8.83□□□□□ -1
TDP1-211ENST00000555178 NPIPB11E5RHQ5 1161 aa8.83□□□□□ -1
TDP1-211ENST00000555178 INMT-MINDY4F8WBC2 141 aa8.83□□□□□ -1
TDP1-211ENST00000555178 SMAD7O15105 426 aaKnown RBP8.83□□□□□ -1
TDP1-211ENST00000555178 SPINT2O43291 252 aa8.83□□□□□ -1
TDP1-211ENST00000555178 TUSC2O75896 110 aa8.83□□□□□ -1
TDP1-211ENST00000555178 HEXAP06865 529 aa8.83□□□□□ -1
TDP1-211ENST00000555178 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
TDP1-211ENST00000555178 VSIG10L2P0DP72 767 aa8.83□□□□□ -1
TDP1-211ENST00000555178 GZMHP20718 246 aa8.83□□□□□ -1
TDP1-211ENST00000555178 NFYBP25208 207 aa8.83□□□□□ -1
TDP1-211ENST00000555178 DSCR9P59020 149 aa8.83□□□□□ -1
TDP1-211ENST00000555178 Q8N7P7 452 aa8.83□□□□□ -1
TDP1-211ENST00000555178 MINDY2Q8NBR6 621 aa8.83□□□□□ -1
TDP1-211ENST00000555178 LY6G5BQ8NDX9 201 aa8.83□□□□□ -1
TDP1-211ENST00000555178 OR52B4Q8NGK2 314 aa8.83□□□□□ -1
TDP1-211ENST00000555178 SECTM1Q8WVN6 248 aa8.83□□□□□ -1
TDP1-211ENST00000555178 CORO2AQ92828 525 aa8.83□□□□□ -1
TDP1-211ENST00000555178 C5orf66Q9H5L9 145 aa8.83□□□□□ -1
TDP1-211ENST00000555178 MGAT4AQ9UM21 535 aa8.83□□□□□ -1
TDP1-211ENST00000555178 SLC31A2O15432 143 aa8.82□□□□□ -1
TDP1-211ENST00000555178 SLC25A16P16260 332 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ARF6P62330 175 aa8.82□□□□□ -1
TDP1-211ENST00000555178 MEF2CQ06413 473 aaPredicted RBP8.82□□□□□ -1
TDP1-211ENST00000555178 TATDN3Q17R31 274 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ESCO2Q56NI9 601 aa8.82□□□□□ -1
TDP1-211ENST00000555178 METTL11BQ5VVY1 283 aa8.82□□□□□ -1
TDP1-211ENST00000555178 PRSS57Q6UWY2 283 aa8.82□□□□□ -1
TDP1-211ENST00000555178 GIMAP1Q8WWP7 306 aa8.82□□□□□ -1
TDP1-211ENST00000555178 MOB3AQ96BX8 217 aa8.82□□□□□ -1
TDP1-211ENST00000555178 SEC22CQ9BRL7 303 aa8.82□□□□□ -1
TDP1-211ENST00000555178 NCOR1P1Q9H4R4 102 aa8.82□□□□□ -1
TDP1-211ENST00000555178 GNG12Q9UBI6 72 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ZNF221Q9UK13 617 aa8.82□□□□□ -1
TDP1-211ENST00000555178 UBE2J1Q9Y385 318 aaPredicted RBP8.82□□□□□ -1
TDP1-211ENST00000555178 LOC105371242A0A075B767 164 aa8.82□□□□□ -1
TDP1-211ENST00000555178 PPIAL4CA0A0B4J2A2 164 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ZNF729A6NN14 1252 aaPredicted RBP8.82□□□□□ -1
TDP1-211ENST00000555178 POM121CA8CG34 1229 aa8.82□□□□□ -1
TDP1-211ENST00000555178 F2RL2O00254 374 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms