RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 C11orf91Q3C1V1 193 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 TCF23Q7RTU1 214 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 FAM185AQ8N0U4 392 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 OR10A7Q8NGE5 316 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 OR8B3Q8NGG8 313 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 OR10V1Q8NGI7 309 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 RFESDQ8TAC1 157 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 UBALD1Q8TB05 177 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 TMEM230Q96A57 120 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 PSMG3-AS1Q96PY0 264 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 OR8B2Q96RD0 313 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 GAL3ST2Q9H3Q3 398 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 C9orf170A2RU37 121 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SSNA1O43805 119 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 YPEL1O60688 119 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 IGHV4-39P01824 125 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 PAX1P15863 534 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 PIGPP57054 158 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 LOXL3P58215 753 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 ABCA11PQ4W5N1 156 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 C11orf88Q6PI97 169 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 FGFRL1Q8N441 504 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 OR52L2PQ8NGH6 319 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 OR52B4Q8NGK2 314 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 OR52M1Q8NGK5 317 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SECTM1Q8WVN6 248 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 YPEL2Q96QA6 119 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SLC5A7Q9GZV3 580 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 PATZ1Q9HBE1 687 aaKnown RBP14.65□□□□□ -0.06
CLIP1-215ENST00000541108 BARX1Q9HBU1 254 aaPredicted RBP14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SLC2A9Q9NRM0 540 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 C19orf12Q9NSK7 152 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 USP9YO00507 2555 aaPredicted RBP14.65□□□□□ -0.06
CLIP1-215ENST00000541108 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 DUS4LO95620 317 aaKnown RBP14.65□□□□□ -0.06
CLIP1-215ENST00000541108 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SSTR2P30874 369 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 LY6G6FQ5SQ64 297 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 TMEM200BQ69YZ2 307 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 AKAP14Q86UN6 197 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 SGPP2Q8IWX5 399 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 CMTM1Q8IZ96 169 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 CCDC71LQ8N9Z2 235 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 EDARADDQ8WWZ3 215 aa14.65□□□□□ -0.06
CLIP1-215ENST00000541108 H1FXQ92522 213 aaKnown RBP14.65□□□□□ -0.06
CLIP1-215ENST00000541108 DOCK11Q5JSL3 2073 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 AKAP6Q13023 2319 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 CRYM-AS1A6NIL9 109 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 GPR31O00270 319 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 RGS11O94810 467 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 VAMP1P23763 118 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 RND3P61587 244 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 MORN2Q502X0 79 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 MITD1Q8WV92 249 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 RTN4IP1Q8WWV3 396 aaPredicted RBP14.64□□□□□ -0.07
CLIP1-215ENST00000541108 AKR1E2Q96JD6 320 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF714Q96N38 554 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 GNG12Q9UBI6 72 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 KCNIP3Q9Y2W7 256 aa14.64□□□□□ -0.07
CLIP1-215ENST00000541108 MEX3AA1L020 520 aaKnown RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 ITGB1BP1O14713 200 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 CCNKO75909 580 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 SFT2D2O95562 160 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 SULT1A3P0DMM9 295 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 SULT1A4P0DMN0 295 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 COL8A1P27658 744 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 S100GP29377 79 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 PDLIM4P50479 330 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 SUPT4H1P63272 117 aaKnown RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 WDR25Q64LD2 544 aaPredicted RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF818PQ6ZRF7 136 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 C12orf45Q8N5I9 185 aaPredicted RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF525Q8N782 197 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 BVESQ8NE79 360 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 GALNT14Q96FL9 552 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 PHB2Q99623 299 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 CCL28Q9NRJ3 127 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 IDI2-AS1Q9NZ38 188 aa14.63□□□□□ -0.07
CLIP1-215ENST00000541108 RBM7Q9Y580 266 aaKnown RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 UTP20O75691 2785 aaKnown RBP14.63□□□□□ -0.07
CLIP1-215ENST00000541108 F5H0A9 414 aaPredicted RBP14.62□□□□□ -0.07
CLIP1-215ENST00000541108 NDUFS8O00217 210 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 SLC22A5O76082 557 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 OR8U9P0C7N5 309 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 PPP1CCP36873 323 aaKnown RBP14.62□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF273Q14593 569 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 FCN2Q15485 313 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 MSMO1Q15800 293 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF787Q6DD87 383 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 HEPN1Q6WQI6 88 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 LDLRAD3Q86YD5 345 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 ZBTB34Q8NCN2 500 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 OR8U1Q8NH10 309 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 C8orf46Q8TAG6 207 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 GFOD1Q9NXC2 390 aa14.62□□□□□ -0.07
CLIP1-215ENST00000541108 A0A0B4J2A0 478 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 TEX13DA0A0J9YY54 714 aaPredicted RBP14.61□□□□□ -0.07
CLIP1-215ENST00000541108 A0A1W2PPH5 198 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 OMGP23515 440 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 ATP5J2P56134 94 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms