RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 H0YJX3 145 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 DEGS1O15121 323 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 TXNL1O43396 289 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 TGOLN2O43493 480 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 IDH3BO43837 385 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 RPP14O95059 124 aaKnown RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 OR2C1O95371 312 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CA1P00915 261 aaPredicted RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 CA2P00918 260 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 TTRP02766 147 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 SCTP09683 121 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CRIP2P52943 208 aaPredicted RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 ODF3L2Q3SX64 289 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 LINC01590Q5TEZ4 76 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 IQCF1Q8N6M8 205 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 Q8NAQ8 132 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 OR2T12Q8NG77 320 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 OTOSQ8NHW6 89 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CD300LFQ8TDQ1 290 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 DYDC1Q8WWB3 177 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 ARL11Q969Q4 196 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 HSH2DQ96JZ2 352 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 MRPL20Q9BYC9 149 aaKnown RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 HRH4Q9H3N8 390 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 PPCSQ9HAB8 311 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 COA4Q9NYJ1 87 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CD300AQ9UGN4 299 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 IKZF2Q9UKS7 526 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CELA1Q9UNI1 258 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 A0A1W2PRQ8 180 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 RRHO14718 337 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 HTR3BO95264 441 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 PRH1P02810 166 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 CD74P04233 296 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 ATP6V1B1P15313 513 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 GSTT1P30711 240 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 OR3A3P47888 321 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 DGCR6Q14129 220 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 PAN3Q58A45 887 aaKnown RBP2.34□□□□□ -2.04
CHD1-211ENST00000514344 SLC25A48Q6ZT89 311 aaKnown RBP2.34□□□□□ -2.04
CHD1-211ENST00000514344 SHFQ7M4L6 423 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 OR9Q2Q8NGE9 314 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 CCDC107Q8WV48 283 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 FAM162AQ96A26 154 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 INTS9Q9NV88 658 aaKnown RBP2.34□□□□□ -2.04
CHD1-211ENST00000514344 NKIRAS1Q9NYS0 192 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 GNG12Q9UBI6 72 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 ING4Q9UNL4 249 aa2.34□□□□□ -2.04
CHD1-211ENST00000514344 IGKV1-12A0A0C4DH73 117 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 LOC110117498-PIK3R3F6TDL0 507 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 NDUFA3O95167 84 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 APOL3O95236 402 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 IGKV1D-12P01611 117 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 GSTP1P09211 210 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 AADACP22760 399 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MAGEA2P43356 314 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 RBP2P50120 134 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MTCP1P56278 107 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MAGOHP61326 146 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 TMEM187Q14656 261 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 FXYD3Q14802 87 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 TMEM30BQ3MIR4 351 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 IFI44LQ53G44 452 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 CT45A1Q5HYN5 189 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 LPCAT4Q643R3 524 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 FAM131AQ6UXB0 335 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 SLC15A3Q8IY34 581 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 SLC38A6Q8IZM9 456 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 OR2C3Q8N628 320 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 CT45A3Q8NHU0 189 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 RP9Q8TA86 221 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 PLPPR1Q8TBJ4 325 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 GALNT14Q96FL9 552 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 TBX5Q99593 518 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MROQ9BYG7 248 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ANKRD19PQ9H560 264 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 METTL1Q9UBP6 276 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 LAMP5Q9UJQ1 280 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 IGHV3-35A0A0C4DH35 117 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 TMEM213A2RRL7 107 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 F8W735 103 aaPredicted RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 H3BN98 237 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 H7C2Y5 167 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MRASO14807 208 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ZNF20P17024 532 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 LGALS7P47929 136 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 FUT6P51993 359 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 MED21Q13503 144 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 EXOSC2Q13868 293 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 ICAM4Q14773 271 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 CDK5R1Q15078 307 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 C12orf74Q32Q52 190 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ZNF585BQ52M93 769 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 Q6P435 159 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ZNF562Q6V9R5 426 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ASCL4Q6XD76 172 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 GLDNQ6ZMI3 551 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms